Nelumbo nucifera (sacred lotus): 104603657
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Entry
104603657 CDS
T04131
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104603657
Spliceosome [BR:
nnu03041
]
Common components
Common spliceosomal components
General mRNP proteins
104603657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
DUF1866
Motif
Other DBs
NCBI-GeneID:
104603657
NCBI-ProteinID:
XP_010266038
UniProt:
A0A1U8ASI2
A0A822ZAZ2
LinkDB
All DBs
Position
Un
AA seq
602 aa
AA seq
DB search
MEFDEYDYLEKTVENPEGPKDKEIVNGDDRAVKSGEKDRSRSSKHRSDDNNDDLDSRSKR
ARSGDDTRDRDRHRDRGSSRHRSSPDHRSRDGERSEKERHRNSREDRDREERSGKERDRD
RDRDRDRDRVRERDRESERDREKERERSRRSRSHSERHRIDRDRDAERERDREFREREKE
RESRERDRDSRRYKEKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRD
VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNTTV
VGGVGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLDPETGQCKGFG
FVQFARLEDARAAQSLNGQLDIAGRIIKVSAVSDQVGMQDVGGNAGDFDDDDGGGLSLNA
RSRALLMQKLDRSGTASSIAGSISTPVVNGASLTLPGTSVLGAAPVVAPLVSPLGQASVP
TFSGLAGASLPVPAVTAPAIDTLGAPSECLLLKNMFDPKVETEPDFDLDIKEDVQDECSK
FGTVKHIYVDKNSAGYVYLRFENAQSAMNAQRSLHGRWFAGKMITATFMLPQNYEAKFPD
SR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtatgattatttagaaaaaacagttgagaatccggaagggccaaag
gacaaggaaatagtgaatggtgacgaccgggcggttaaatcaggagaaaaagatcggagc
cgaagctctaagcatcggagcgacgataacaatgatgatctggatagccgttcgaagcgg
gcaagatccggagacgacacccgtgatcgcgacaggcacagagacagaggttcctcacgt
caccgttcgtctcctgaccaccgctctagggatggggagcggagcgagaaggaacgacat
agaaacagcagggaagacagggatagggaggagaggagtggcaaggaaagagaccgggac
cgagaccgagaccgagaccgcgatagggtaagagagcgtgatcgtgaaagcgaacgagat
agggagaaagaacgtgaacgatcacgtaggagcaggagccactcggaaaggcaccgcatt
gaccgtgatagggatgcagagcgcgagagagacagagagttcagggaaagagaaaaggag
agggagtcgagagaaagggatcgagatagcaggcgatataaagagaaaaaggaggaagtg
gcagagccagaggctgatcctgaacgagatcaaaggactgtatttgcttatcagatttgt
ttgaaggcagatgaaagggatgtatatgaattcttttcaagggccggcaaggtgcgggat
gtgcgtctcataatggatcgcaattcaaggcgttcaaagggagttgggtatattgaattt
tatgatgcaatgtctgtccctatggcaatagcactctcgggtcaaccacttcttggtcaa
ccagtgatggttaagccatcagaggctgagaagaatctggtccagtcaaatacaactgta
gttggaggagtgggtggtcttattggaccctattcaggaggagctagaaggttgtatgtt
ggcaatctgcatttcaatatcacagaagaccaacttcgtcaggtttttgaaccatttggt
gctgtggagttggtgcagttgccccttgatccggaaactgggcaatgcaaaggttttggc
tttgtccaatttgcacgtcttgaagatgctagagctgctcagagtttaaatggacaatta
gacattgctggccgtataatcaaggtatctgctgtttctgatcaagttgggatgcaagat
gttgggggaaatgctggtgattttgacgatgacgatggcggaggcttgtctctgaatgct
cgctccagggctcttctaatgcaaaagctggatcggagtggcacagcatcaagcattgct
ggttcaattagcacacctgttgtgaatggcgctagccttactctaccaggaacatcagtt
cttggtgctgcacctgtggttgctccccttgtttctccccttggacaggcatctgtgccc
acattttctggattggcaggtgcatcccttccagttccagctgtaactgcgcctgcaata
gatactttgggcgcaccgagtgaatgcctgttactgaaaaatatgtttgacccaaaagtt
gagacagaaccagattttgatttggatatcaaagaggatgtccaagatgaatgttcaaag
ttcggaactgtaaagcatatctatgtggacaagaatagtgctggctatgtatatttacgc
tttgaaaatgctcaatctgctatgaatgcacaacggtcactccatgggaggtggtttgca
ggaaagatgataacagcaacgtttatgctgccccaaaactacgaggccaaattcccagac
agtagatag
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