Nelumbo nucifera (sacred lotus): 104603881
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Entry
104603881 CDS
T04131
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104603881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104603881
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104603881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
104603881
NCBI-ProteinID:
XP_010266370
UniProt:
A0A1U8AFM7
A0A822YT81
LinkDB
All DBs
Position
Un
AA seq
951 aa
AA seq
DB search
MRPRNQSKRQRESTGKKDATKAKDVMECNSCTTLYHDNGLSRGDEGSLLKQASFCNSLGK
KKKGSSISNSESDAMPEDGQNGSDKQDINMKATFGAKVVGARGQDPNKSTQLERKVEEPI
ISCTYPGQEEDMDESDWEDGSIPVSNSRSYHLNNLTGEVTVEFSESLSPAKRKSIRRASV
EDKELAELVHKVHLLCLIARGRLIDKACNDPLIQASLLSLLPKHLMRIAEVPKLTVNVLA
PLVSWFHDNFHLKGPSSSDSDRSFKAALAHALETRAGAAEEVAALSVALFRALDLTTRFV
SVLDVASLKPEVDMPGCSNQDATRKEMGIFNSSTLMVSRLNQAALSPSPIQLSLDKTTPK
GDIAHESSHKDSKASNDNTESCLTKKAEGSKRKGDLEFELQLEMALSATAAGICEGDAGP
DLKELHTTSGFPSLRRLKRIKTEDSIVSSQGVSTALGSRKVGPPLHWAEVYCNGENLTGK
WVHIDAANAFLDGEHKVEAAVTACRTSLRYVVAFAGHGAKDVTRRYCMKWYKIASQRINS
HWWDTVLAPLRELESHATGGVVQLEVHQESASTRKDLQSNESMPEMSSREVSKEHGANIN
VEISTQNSTIATRNVLEDMELETRALTEPLPTNQQAYKNHHLYAIERWLTKYQILHPKGP
ILGFCSGHPVYPRSSVQTLQTKQRWLREGLQVKENELPAKVVRRSLKLVKTQDLEFGNCN
EDNSEGTLELYGKWQMEPLCLPQAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPV
VKRLEIDFAPAMVGFEFRNGRSIPIFEGIVVCKEFKGAILEAYAEEGERRDAEEKRRIEA
QSISRWYQLLSSIITRQRLNNCYGGDSFSQASERILPKDEKYGPKTCTSKDDVQSLGCHG
HVRGANSDTQSAVLGDDHEHVFPVEDQSFDEESSVRTKRCPCGFSVQVEEL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctagaaatcagtcgaaacggcaacgggaatcaacgggaaagaaggatgcaacg
aaggctaaagatgttatggaatgcaacagttgcacaacattatatcatgataatggtttg
tcgagaggggatgaaggcagccttctgaaacaagcaagtttttgcaactcactagggaag
aagaaaaaagggagctccattagtaattctgagtctgatgcaatgccagaagatggacag
aatgggagtgataaacaagatataaacatgaaagctacatttggtgcaaaggtagttgga
gctagaggtcaagatccaaataaaagcactcagctggaaagaaaagttgaggagccaatt
atttcctgtacttatcctggtcaggaagaagatatggatgagtcagactgggaggatggt
tctatacccgtctcaaattctagatcctatcatcttaataatctcacaggggaggtgact
gttgaattcagtgagtcactgtctcctgctaagcggaagtctattcgaagagcttctgtt
gaagacaaggaattggctgagcttgtgcataaggtgcatttgctatgcttaatagcacga
ggaagattaattgacaaagcttgcaatgatcctcttattcaggcttcattactttcactt
cttccaaaacacctaatgaggatagcagaagtcccaaaactgactgttaatgtattggca
cctcttgtcagttggttccatgataacttccatcttaaaggcccaagcagttcagattca
gatagatcctttaaggctgcccttgcccatgctcttgaaacacgtgcaggggcagcagag
gaggttgctgcattgtctgtggcactattcagagctcttgatcttacaacccggttcgtg
tctgtgctggatgtggcctctctcaaaccagaagttgacatgcctggctgttcaaaccaa
gatgcaactaggaaggagatggggatttttaattcttccacattgatggtttccaggctg
aatcaggctgcattgtctccctctcccattcagttatcattagacaaaacaacgcccaaa
ggagacattgcccatgaatcttctcataaagattcaaaggcaagcaatgataatactgaa
tcatgtcttaccaaaaaagctgaaggttcaaagaggaaaggcgatctagagtttgagcta
caattggaaatggctctttctgccactgcagcaggtatttgtgagggtgatgcaggccca
gatttaaaagagctgcatactacatcaggttttccttcattgagaaggttgaaaagaatt
aaaactgaagattccatagtttcttcccaaggagtctctactgcacttggatcaagaaaa
gtaggacctccactgcattgggcagaagtctattgtaatggagaaaacttgacagggaag
tgggtgcatattgatgctgccaatgcatttcttgatggtgagcacaaagtagaagctgca
gtaactgcctgcagaacgtctctgagatatgtagttgcttttgctgggcatggggccaaa
gatgtgactcgcaggtattgtatgaagtggtacaagattgcatcacaacgtataaattca
cattggtgggatacagttttggcaccattgagggagctggagtcacatgcaactggtggt
gtagtccagttggaagtgcaccaagagagtgcttcaactcgaaaagatcttcaaagcaat
gaaagcatgcctgaaatgtccagtagggaagtgtctaaagagcatggtgcaaatatcaat
gtggaaatttccacacagaattctacaattgctaccaggaacgttcttgaggatatggag
ctggaaactagggcattaacagagcctcttccaactaaccaacaggcatataaaaatcat
cacctttatgccattgaaagatggcttaccaagtatcagatacttcatccaaagggccct
atacttggtttttgttctggtcatccagtctatcctcgatcatctgtccagacgctacaa
acaaaacagaggtggctgcgagaggggttgcaagttaaagaaaatgagcttcctgcaaag
gtggttagacgttctctaaaacttgtcaaaactcaagatttggagtttggtaattgtaat
gaagataatagtgaaggaactcttgagctttatggaaaatggcaaatggaaccattatgc
cttcctcaggctgttaatgggattgtaccaaagaacgagcgcggtcaagtggatgtgtgg
tccgagaagtgtctcccacctggcactgtgcacctgaggttacctagggtggtccctgtt
gtaaagaggctggagattgattttgcccctgcaatggttgggtttgaatttcggaatggc
cgatccattcccatctttgaagggattgtagtgtgcaaagaatttaaaggtgcaatattg
gaggcatatgcagaagaaggagagagaagagatgctgaagagaagagacggattgaagcc
caatctatttctagatggtatcagcttctttcatcaattataacacgacaacggttgaat
aactgctatgggggtgattcattttcacaggcatctgaacgcatcctcccaaaggatgaa
aaatatggacctaagacttgtactagcaaggatgatgtgcaatctcttggatgccatggc
catgtacgaggtgccaattctgatactcaatcagctgtgcttggtgatgaccatgaacat
gtatttccagtagaagaccagagttttgatgaagaaagttcagtgcgaaccaaacgctgc
ccttgtgggttttcagttcaagtggaggaactttag
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