KEGG   Nelumbo nucifera (sacred lotus): 104603881
Entry
104603881         CDS       T04131                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104603881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104603881
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104603881
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 104603881
NCBI-ProteinID: XP_010266370
UniProt: A0A1U8AFM7 A0A822YT81
LinkDB
Position
Un
AA seq 951 aa
MRPRNQSKRQRESTGKKDATKAKDVMECNSCTTLYHDNGLSRGDEGSLLKQASFCNSLGK
KKKGSSISNSESDAMPEDGQNGSDKQDINMKATFGAKVVGARGQDPNKSTQLERKVEEPI
ISCTYPGQEEDMDESDWEDGSIPVSNSRSYHLNNLTGEVTVEFSESLSPAKRKSIRRASV
EDKELAELVHKVHLLCLIARGRLIDKACNDPLIQASLLSLLPKHLMRIAEVPKLTVNVLA
PLVSWFHDNFHLKGPSSSDSDRSFKAALAHALETRAGAAEEVAALSVALFRALDLTTRFV
SVLDVASLKPEVDMPGCSNQDATRKEMGIFNSSTLMVSRLNQAALSPSPIQLSLDKTTPK
GDIAHESSHKDSKASNDNTESCLTKKAEGSKRKGDLEFELQLEMALSATAAGICEGDAGP
DLKELHTTSGFPSLRRLKRIKTEDSIVSSQGVSTALGSRKVGPPLHWAEVYCNGENLTGK
WVHIDAANAFLDGEHKVEAAVTACRTSLRYVVAFAGHGAKDVTRRYCMKWYKIASQRINS
HWWDTVLAPLRELESHATGGVVQLEVHQESASTRKDLQSNESMPEMSSREVSKEHGANIN
VEISTQNSTIATRNVLEDMELETRALTEPLPTNQQAYKNHHLYAIERWLTKYQILHPKGP
ILGFCSGHPVYPRSSVQTLQTKQRWLREGLQVKENELPAKVVRRSLKLVKTQDLEFGNCN
EDNSEGTLELYGKWQMEPLCLPQAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPV
VKRLEIDFAPAMVGFEFRNGRSIPIFEGIVVCKEFKGAILEAYAEEGERRDAEEKRRIEA
QSISRWYQLLSSIITRQRLNNCYGGDSFSQASERILPKDEKYGPKTCTSKDDVQSLGCHG
HVRGANSDTQSAVLGDDHEHVFPVEDQSFDEESSVRTKRCPCGFSVQVEEL
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcgacctagaaatcagtcgaaacggcaacgggaatcaacgggaaagaaggatgcaacg
aaggctaaagatgttatggaatgcaacagttgcacaacattatatcatgataatggtttg
tcgagaggggatgaaggcagccttctgaaacaagcaagtttttgcaactcactagggaag
aagaaaaaagggagctccattagtaattctgagtctgatgcaatgccagaagatggacag
aatgggagtgataaacaagatataaacatgaaagctacatttggtgcaaaggtagttgga
gctagaggtcaagatccaaataaaagcactcagctggaaagaaaagttgaggagccaatt
atttcctgtacttatcctggtcaggaagaagatatggatgagtcagactgggaggatggt
tctatacccgtctcaaattctagatcctatcatcttaataatctcacaggggaggtgact
gttgaattcagtgagtcactgtctcctgctaagcggaagtctattcgaagagcttctgtt
gaagacaaggaattggctgagcttgtgcataaggtgcatttgctatgcttaatagcacga
ggaagattaattgacaaagcttgcaatgatcctcttattcaggcttcattactttcactt
cttccaaaacacctaatgaggatagcagaagtcccaaaactgactgttaatgtattggca
cctcttgtcagttggttccatgataacttccatcttaaaggcccaagcagttcagattca
gatagatcctttaaggctgcccttgcccatgctcttgaaacacgtgcaggggcagcagag
gaggttgctgcattgtctgtggcactattcagagctcttgatcttacaacccggttcgtg
tctgtgctggatgtggcctctctcaaaccagaagttgacatgcctggctgttcaaaccaa
gatgcaactaggaaggagatggggatttttaattcttccacattgatggtttccaggctg
aatcaggctgcattgtctccctctcccattcagttatcattagacaaaacaacgcccaaa
ggagacattgcccatgaatcttctcataaagattcaaaggcaagcaatgataatactgaa
tcatgtcttaccaaaaaagctgaaggttcaaagaggaaaggcgatctagagtttgagcta
caattggaaatggctctttctgccactgcagcaggtatttgtgagggtgatgcaggccca
gatttaaaagagctgcatactacatcaggttttccttcattgagaaggttgaaaagaatt
aaaactgaagattccatagtttcttcccaaggagtctctactgcacttggatcaagaaaa
gtaggacctccactgcattgggcagaagtctattgtaatggagaaaacttgacagggaag
tgggtgcatattgatgctgccaatgcatttcttgatggtgagcacaaagtagaagctgca
gtaactgcctgcagaacgtctctgagatatgtagttgcttttgctgggcatggggccaaa
gatgtgactcgcaggtattgtatgaagtggtacaagattgcatcacaacgtataaattca
cattggtgggatacagttttggcaccattgagggagctggagtcacatgcaactggtggt
gtagtccagttggaagtgcaccaagagagtgcttcaactcgaaaagatcttcaaagcaat
gaaagcatgcctgaaatgtccagtagggaagtgtctaaagagcatggtgcaaatatcaat
gtggaaatttccacacagaattctacaattgctaccaggaacgttcttgaggatatggag
ctggaaactagggcattaacagagcctcttccaactaaccaacaggcatataaaaatcat
cacctttatgccattgaaagatggcttaccaagtatcagatacttcatccaaagggccct
atacttggtttttgttctggtcatccagtctatcctcgatcatctgtccagacgctacaa
acaaaacagaggtggctgcgagaggggttgcaagttaaagaaaatgagcttcctgcaaag
gtggttagacgttctctaaaacttgtcaaaactcaagatttggagtttggtaattgtaat
gaagataatagtgaaggaactcttgagctttatggaaaatggcaaatggaaccattatgc
cttcctcaggctgttaatgggattgtaccaaagaacgagcgcggtcaagtggatgtgtgg
tccgagaagtgtctcccacctggcactgtgcacctgaggttacctagggtggtccctgtt
gtaaagaggctggagattgattttgcccctgcaatggttgggtttgaatttcggaatggc
cgatccattcccatctttgaagggattgtagtgtgcaaagaatttaaaggtgcaatattg
gaggcatatgcagaagaaggagagagaagagatgctgaagagaagagacggattgaagcc
caatctatttctagatggtatcagcttctttcatcaattataacacgacaacggttgaat
aactgctatgggggtgattcattttcacaggcatctgaacgcatcctcccaaaggatgaa
aaatatggacctaagacttgtactagcaaggatgatgtgcaatctcttggatgccatggc
catgtacgaggtgccaattctgatactcaatcagctgtgcttggtgatgaccatgaacat
gtatttccagtagaagaccagagttttgatgaagaaagttcagtgcgaaccaaacgctgc
ccttgtgggttttcagttcaagtggaggaactttag

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