Nelumbo nucifera (sacred lotus): 104603905
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Entry
104603905 CDS
T04131
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104603905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104603905
Spliceosome [BR:
nnu03041
]
Complex B
Other components
Prp19-related factors
104603905
Complex C
104603905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
HTH_54
Motif
Other DBs
NCBI-GeneID:
104603905
NCBI-ProteinID:
XP_010266367
UniProt:
A0A1U8ATZ7
A0A822Z4G0
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MFEERRVHPDCINASNPYHECVEYCFRRIAEAKERSKQEGSEVKETSGGVDASGPSHSDS
PDQDEDPYGDRSDLEKQGDGDDDHPVEENVEPDFTKLTGRQKKLFDLRLKMNEARKANQT
AMVAEKKRMEAPQESRGISKQKWLEERKKKIGKLLDANGLDMSKAYMFDTEETAEAKYKK
WEKDPAPFGWDVFNQKTLYNAYKKRTKNIECDIEEYNKMKEADPEFYRDASSLQYGKTPK
ISEEKIDKMVKELQDREEKRKAFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEI
KNNLERGTALPD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggaaaggagagtgcaccccgattgcataaatgcttccaacccatatcatgaa
tgcgtcgagtattgcttcagaagaatagctgaagccaaggaacggagcaagcaagaagga
tcagaagttaaagaaactagtggtggtgtggatgctagtggcccatcacattcagattcc
cctgatcaggatgaggatccttatggtgacagatctgatcttgaaaaacagggtgatggg
gatgatgatcatcctgtagaggagaatgtggaaccagactttacaaaactcacagggagg
cagaaaaagttgtttgatttaaggctcaagatgaatgaagccaggaaagctaaccaaact
gccatggttgcggaaaagaaaagaatggaagctccacaggagtcaaggggcatttctaaa
caaaaatggcttgaagaaaggaagaagaaaattggaaaactacttgatgcaaatggtttg
gatatgtcaaaggcatatatgtttgatacagaagagacggcagaggcaaaatataagaaa
tgggaaaaggatcctgctccatttggttgggatgtttttaatcaaaaaacactgtacaat
gcctacaaaaagcggacaaagaatatagagtgtgatattgaagaatataataaaatgaaa
gaagctgatccagagttctaccgtgatgcttccagcctccaatatggaaaaacaccaaag
atttctgaggaaaagattgacaagatggtgaaggagctccaggacagggaggagaagcgg
aaagcatttagtagaaggcgtaggttccatgaagagaaggatattgactctatcaatgac
cgtaatgagcatttcaacaagaagattgaaagagcctttggaaagtatacattggagatt
aagaacaatcttgagagaggaactgctttgccagactga
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