Nelumbo nucifera (sacred lotus): 104603939
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Entry
104603939 CDS
T04131
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104603939
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104603939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
NBCH_WD40
TPR_2
TPR_1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
TPR_8
Beta-prop_SCAP
WDR90_beta-prop_4th
TPR_14
Beta-prop_IFT140_1st
Beta-prop_VPS8
TPR_17
TPR_16
ANAPC3
TPR_19
Motif
Other DBs
NCBI-GeneID:
104603939
NCBI-ProteinID:
XP_010266423
UniProt:
A0A1U8AU38
A0A822Z7E5
LinkDB
All DBs
Position
Un
AA seq
763 aa
AA seq
DB search
MDTMNFSDGNIYDLLESRTIDFHYDVNQKLQMHSSLIQRLSLEKELEGHQGCVNAVAWNS
KGSLLISGSDDTQLNIWSYSSQKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDSEVR
LFHLSHLSGRTLEENSIAPSAVFHCHNRRVKKLAVEVGNPNVVMSASEDGTLRQHDFRES
ASCPPAGSSHQECHNILLDLRCGAKKSLADPPKQCLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLSPLSSSQKKMKPPPCVNYFCPMHLSERGRSSLHLTHVTFSPNDEEVLLSYSG
EHVYLMDVNLGGESVIKYTVGDILKQGSLVPVFGGHEMPPVTSKVLPDGFSRKSMVSARI
NKCKELVQAAEKYLKEGTDYLDGIEACNEVLDGKGPEIGIALKHQALCTRAALFLKRKWK
NDAHMAIRDCNKAHYIDPSSFSAHYYMSEALSQLGKHKEALEYALDAQSLDPSNSEVAER
VKSIKEQLDAVEAERSKNETDCPPKPEARSGRIRSLSDILYRSEVNSDASQDGPRSERED
SDYDEEMELDFETSISGDEGRDAESNILRGSLNLRIHRRGDSSRENGSANGLYGSPTSSS
QNDNTAYQPEAVTDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFIWHKRTGR
LIKMLLGDETVVNCIQCHPFDCSVATSGIDHTIKIWTPRAIMPSMVAGGVMGPDTADVLT
VMENNQQKLRRNREALLPFELLERFRMHEFAEGTFHPFECAQS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgaatttctccgatggcaacatctacgatttgcttgagagtagaaccatc
gacttccactatgatgttaatcagaagctgcaaatgcactcatcattgatacaaaggctt
tccttagaaaaggagctagagggacatcagggttgtgtgaatgctgtggcatggaattca
aaaggctcacttttgatatctggatcagatgatacacagcttaacatttggagctactca
agccagaagcttttgcacagtattgatactgggcatactgccaatatattttgtacaaaa
tttgttccagagacttctgatgagcttgttgtttctggtgctggagattcagaagttcgc
ttgttccatttatctcatttaagtgggagaacacttgaagaaaattctattgcaccttca
gcagtgtttcattgtcataataggagagttaagaagttagctgtggaagttggaaatcct
aatgtagtaatgagtgcaagtgaagatgggacattgaggcaacatgacttccgggagagt
gcttcatgtccaccagctggctcttctcaccaagaatgtcacaatattctacttgacttg
cggtgtggagcaaagaagtcactagctgatcctcctaaacagtgtcttgctttaaaatct
tgtgacattagttctactcggccacatttgcttcttgttggtggcagtgatgcctttgct
cgtttatatgatagaaggatgctttcaccattgagttcctcacagaaaaagatgaagcca
cctccctgtgtcaattatttctgtccaatgcatctttctgaacgtggaagatcaagcttg
cacctgactcatgttacttttagtccaaatgatgaagaagttcttcttagctatagtgga
gagcatgtttacttgatggacgtgaatcttggtggtgagagtgttatcaaatatactgtt
ggagacattttaaagcaggggtccttggttcctgtatttggtggacatgagatgccacca
gtgacatcaaaagtccttccagatggcttttccagaaaaagcatggtttctgcaaggatt
aataaatgcaaggaattggttcaagctgctgaaaaatacttgaaggaggggacagattat
ttagatggaattgaagcatgcaatgaagtacttgatggaaaaggtcctgaaattgggatt
gcactaaagcatcaagccttgtgtacccgtgcagctttatttcttaagcggaagtggaaa
aatgatgcccatatggccataagagactgcaataaagctcattatattgatccttcatca
ttcagtgcacattactacatgtctgaagctctatcacagttagggaaacacaaagaagca
ctagagtatgcacttgatgcacaatctttggatccttcaaattctgaggtggcagaaagg
gtgaaaagtataaaagagcagcttgatgcagttgaagctgaaagaagcaaaaatgaaact
gattgcccacccaagcctgaagctcgatctggaagaatacgatctttgagtgatatactc
taccgatcagaggtaaacagtgatgcatcacaggatggtccgagatctgaaagagaagat
tctgactatgatgaagaaatggagctggactttgaaacatcaatatctggtgatgaaggg
cgtgatgctgagtcaaacattctgcgtggaagtctgaacttaagaattcatcgaaggggt
gattcatctagagagaatggttctgcaaatggcttatatggatctcctacttcatcttca
cagaatgataatacagcttatcagcctgaagcagtaactgatatgaagcaacgatatgtt
ggccattgtaatgtagggactgacataaaacaggctagttttcttggccaaagaggtgaa
tatgttgccagtggaagtgatgatgggagatggttcatttggcacaagagaactggaaga
ctgataaaaatgcttcttggtgatgaaactgttgtcaactgcatacagtgccatccattt
gattgcagtgttgcaaccagtgggattgatcacacaattaaaatatggacaccaagggcc
ataatgccatccatggtagctggaggtgtcatggggccagacactgcagatgtgctgact
gtcatggaaaacaatcaacagaagctgcgtcgcaaccgtgaagctctgctgccctttgaa
cttcttgaacggtttaggatgcatgagtttgctgaaggaacatttcatccatttgagtgt
gcccagagctaa
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