Nelumbo nucifera (sacred lotus): 104603972
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Entry
104603972 CDS
T04131
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104603972
Transcription machinery [BR:
nnu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104603972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
104603972
NCBI-ProteinID:
XP_010266467
UniProt:
A0A1U8AKG2
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All DBs
Position
Un
AA seq
514 aa
AA seq
DB search
MGVVTVSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTP
KENQKRLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDTD
RVGRRRRRTRKKLGEADRKTGKESSDNVIRNHNKNKRLSLDRRIALRRKKEEGAVQLSGV
KEGSKEDGDVDKLVGEYSVSTDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNALFQMKE
NLHRDLGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKYFQEFA
NGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLE
SVRVEIQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHAITQEE
FINGITDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctagttcgtcttctcaaactccattaggcttgagctcaagg
ttctcagtgcaccagactcaattgaagagaccattgatcttggccttcaaaacagataaa
gccaaggacagagcattggttacacaccatgagcccatcccattaccaatggacactccc
aaagaaaaccagaagaggctaaggagagccacaaagccttctaaaagagtaaaagttgtc
tgttctgatgaagcttcttcatgcaccatagaaatggattacaatgatgttgcggccaaa
cttgaaagtatatataaacttagtcccccaacagatgtttctgatgtggatgacactgat
cgtgtgggcaggaggcgtcgtcggacaagaaaaaagcttggagaagctgatcgcaaaact
ggaaaagaatcaagtgataatgtgataaggaaccacaataagaataagcggttgagtctt
gataggaggattgcattgagaaggaagaaggaggaaggggcagttcaattgagtggggtg
aaggaaggtagcaaggaggatggagatgttgacaagctggttggagaatattctgtttca
actgatttggccagcttggattggaagaagatgaagataccaccagttcttccttcttct
gagcatgcttggttattcaagttgatgcaacctatgaatgcactctttcaaatgaaggag
aatttgcacagagatctgggaagagaaccaactgatggtgaattagcagattcaacaaat
atgagtgtatttcaagtgagaaggtgtatagaagttggtcgagctgcaaggaacaggcta
attaagcacaatcttcgattagttttattcgtaatcaataagtattttcaagagtttgcg
aatggaccaaaattccaagacctttgccaagcaggagtaaagggactcatcacagccatt
gaccgctttgaaccaaaaaggaggttcaggctatccacttatggtctattctggatcagg
catgctatcatgcgatctatgacactctcaagcttcacacgtgtctccttcggccttgaa
tcggtcagagtagagattcaaagggccaaactagagttaatgtttgagcttgagaggctt
ccaacagaggaagagataataaagaaagtaggaatctccccagagagataccatgaagtc
attaaggcctctaaacctgtcttttctctccattcaagacatgcaattacacaagaagag
ttcataaatggaatcactgacatcgaaggtgttggaggtgataaacggaggcaacctgcc
cttctcaggcttgctcttgatgatgtgctcgactctctgaagcccaaggagagcttggtg
atcaggcagagatacggtctggatggaaaaggagatcgaacattgggagagattgcagga
aacctaaacatatcaagagagatggtgcgaaagcatgaagtgaaagctctcatgaaactt
aagcacccaactcgagttgactatctccgcagatacattttctaa
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