Nelumbo nucifera (sacred lotus): 104604030
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Entry
104604030 CDS
T04131
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104604030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104604030
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104604030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
104604030
NCBI-ProteinID:
XP_010266548
UniProt:
A0A1U8AKN1
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Position
Un
AA seq
644 aa
AA seq
DB search
MEEQRDGGKVHALIEKATTSTASEVDPRLLKAIKSVVRSSDSEVRLAVETLMEKMKKDHS
QVRYLALLIVDELFMRSKLFRSLLVVNFDQFLSLSVGFRRNLPLPAPPSVASILRSKAIE
FLEKWNAAFGIHYRQLRLGFDYLKNTLRFQFPNLQQNAARLQQQRQERETRSREILLKKF
ETLQENLSIIKSEIQSTIDQIGECLDIVGIKEDGSATCATVDDDVEEYRSSALWQIRLES
LKEGEKVHENNDNKVVFDVLRELYKLLVTKHLACVQEWISVLVRVEPDDKRIRDSTLKEF
IDIRNCLQSVKNRCEQSGVALQNIANHEEEDLWEVGKVEVHDCGNSSLMSNRSEDLPSIS
TINEEKDKDPGCSKTINVEESLDHGGSISGSTSLRRKLLAEAPVVTWDSFLDIWGSNRVV
LANQRGMELEGHWGRVDYDAVIPAENIAELNVHKTLYKEEPVEIQPCRAPLNRGGLCQRR
DLRVCPFHGLIIPRDAEGNPINQNPSVDEAKLDLRNKVVESLAKQAVKNVRDRDREEANN
KDDRQSLKRAKLAKVREHNEAVLRKAAIASTSHSEIVGDVEAVDRNRRGVREEKKTLASM
LRKKITPKDRLAQKLLNTRVRDATTRQLTLGEDEKYREAYPNQW
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagagagatggagggaaggtgcatgcgctaatcgagaaggcaacgacctca
acagcttcagaggtggaccctcgccttctcaaagccatcaaatcggttgttcgttcttct
gactccgaggttcgtcttgctgtcgaaaccctaatggagaagatgaagaaagaccactcg
caggttaggtaccttgcgcttcttatagttgatgaactgttcatgaggtcgaagctgttt
agatccctccttgttgtgaactttgatcagtttctgagtttgagtgtaggattcagaagg
aatctgccacttcctgcccctccttctgttgcatcaattctacgatcaaaagccatagaa
tttttggaaaagtggaatgcagcatttgggattcattacagacagctcagattagggttt
gactacttgaaaaacacccttcggtttcaattccctaatcttcagcaaaatgcagctcgg
ttacagcaacagagacaagaaagggaaactaggtcaagggaaatattactgaaaaagttt
gaaactcttcaggaaaatctttccatcataaaaagtgaaatacaatccactattgatcag
ataggagaatgtttagatattgttggtattaaagaagatgggtctgcaacatgtgctaca
gtggatgatgatgttgaagagtatcgtagttctgccttgtggcagatccgtcttgaatca
ctgaaagaaggggaaaaagttcatgaaaacaatgacaataaggtggtctttgatgtattg
agggaactatacaagctactagtgacaaagcatttggcgtgtgtgcaagaatggatctcc
gttcttgtgagggttgaaccagatgacaaaagaatcagagattccacactgaaagagttc
attgatattcgcaattgtcttcaatcagtgaagaatagatgtgagcaatcaggtgttgcc
ctgcagaacattgcaaatcatgaggaagaagatctttgggaggttggtaaggtagaagtg
catgattgtggaaattctagtttaatgagcaaccgtagtgaagatcttcccagtatttca
actatcaatgaagaaaaggataaagatcctggctgcagtaagaccataaatgtagaggag
tccttggatcatggaggaagcatatctggttcaacgtctcttaggaggaagcttttggct
gaagctccggttgtgacttgggactctttcctggacatatggggttcaaatcgagttgtt
ttggccaaccagagggggatggaacttgagggtcattggggtagggttgactatgatgca
gttattccagcagaaaacattgctgagttgaatgtccataaaactctgtacaaagaagag
cctgttgaaatccaaccttgccgtgctcctttgaacagaggcggactttgtcagagaagg
gacttgagagtttgcccatttcatgggcttatcataccccgagatgctgaagggaatcca
atcaatcaaaacccatcagtagatgaagcaaaacttgatttgaggaataaggtagttgaa
tcattagcaaaacaggcagtgaaaaatgtacgtgatagagatagagaagaagcaaataat
aaagacgatagacagtcattgaagcgtgcaaagctagcaaaagttcgtgaacacaatgaa
gcggtcctacgcaaagctgcaattgcatcgacctcacattctgaaattgttggagatgtg
gaagcagttgacaggaacaggcgtggggtcagagaggagaagaaaacactggcatcgatg
ctgcgtaagaaaataactccaaaggatagattggcacagaagctcttgaacacccgtgta
agagatgcaacgacaagacagcttacgctgggggaggatgaaaaatacagagaagcttat
ccaaaccaatggtag
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