Nelumbo nucifera (sacred lotus): 104604096
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Entry
104604096 CDS
T04131
Name
(RefSeq) exosome complex component RRP45B-like
KO
K03678
exosome complex component RRP45
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104604096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104604096
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104604096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104604096
NCBI-ProteinID:
XP_010266625
UniProt:
A0A1U8ATZ4
A0A822YXQ0
LinkDB
All DBs
Position
Un
AA seq
280 aa
AA seq
DB search
MEQRLANTWRMSVNEKKFIETVLLSDLRVDGRRPFDYRQLTVKFGREDGSSEVQLGQTHV
MGFVTSQLVQPYRDRPNEGTLSTIYTEFSPMADPSFEAGRPGEFAVELGRIIDRGLRESR
AIDTESLCVLAGKLVWSIRVDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQE
VIIHPPEVKEPLPLTIHHLPIAVTFAFFGDGNTVVIDPTHNEEAVMGGRMTATLNTNGDV
CAVQKAGGEGVMQSVIMQCLRIASVTATDITSKIKNAVEE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaagattggcaaacacttggcggatgtcagtcaatgaaaagaagtttattgag
acagtattactttcggacctcagggttgatggtcgtcgtcctttcgattatcgtcagttg
actgttaagtttgggagagaggatggatcttcagaagtgcagctaggacagactcatgtt
atgggatttgtcacttctcaactagtacaaccatatcgagacaggccaaatgaaggaacc
ctttcaacaatatatactgagttttcaccaatggctgacccttcatttgaggcggggcgt
cctggggagtttgctgtggaacttggacgaataatagaccgaggtttaagggagagcagg
gcaatagatacagaatcactttgtgtgcttgctggaaagttagtctggtccattcgtgtt
gatcttcacattcttgataatggagggaatctggttgatgctgctaatattgctgctttg
gctgcgctactgacattccgaaggccagaatgtacattaggaggtgaagatggtcaggaa
gtgataattcatccacctgaggtgaaggagccactccctctgacaatacatcatcttcct
atagcagtaacctttgcattttttggtgatgggaacactgtggtgatagatccaactcac
aatgaagaggcggttatgggaggaagaatgactgccacattgaatacaaatggcgatgtc
tgtgctgtccaaaaagcaggtggagagggtgtcatgcagagtgtgattatgcagtgtttg
cgaattgcttctgtgacggccactgacataacaagcaaaataaaaaatgcggttgaagaa
taa
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