Nelumbo nucifera (sacred lotus): 104604252
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Entry
104604252 CDS
T04131
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104604252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nnu04131
]
104604252
Membrane trafficking [BR:
nnu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104604252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
CowN
Motif
Other DBs
NCBI-GeneID:
104604252
NCBI-ProteinID:
XP_010266826
UniProt:
A0A822ZV71
A0A1U8AI35
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All DBs
Position
Un
AA seq
789 aa
AA seq
DB search
MTSGGIEDEEKWLAEGIAGLQHNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKY
YDLYMRAFDELRKLEMFFKEEARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQQQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFTKLSNAIGKVIEAQVDMPVVGAVTLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKARIEDAKATKQIVALLSAPLEKYNDIVTALNLSNYPLVMD
HLDNATNKVMAVVIIQSIMKNNTYISTDDKVEALFQLIKGLIKDLDGSLVEELDEEDFKE
EQNSVARLIHMLHNDDPEEMLKIICTVRKHILTGGPKRLPFTVPPLIFSALKLIRQLQGQ
DGDVVGEDVPATPKKIFQLLNQTIEALSSVPSPELALRLYLQCAEAANDCDLEPVAYEFF
TQAFILYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
KAVYACSHLFWVDDQDGVKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPQITSAAIQGLIELITNEMQSDTTTDPFADAFFASSLRYIQFQKQKGGGM
GEKYESIKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaggcgggatcgaagatgaagagaaatggctggcggaagggatcgccggactt
caacacaatgccttctatatgcatcgcgcactggattcgaacaatctcaaggacgctctc
aagtattctgctcagatgctctccgagcttcggacttcccggctttcccctcacaaatac
tacgacctttacatgcgagccttcgatgaattgagaaagctggagatgttcttcaaggag
gaagcgagacgtggttgctcgatcattgatctttatgaacttgtacaacatgctggaaac
atcttgcctcgactgtatcttctctgtactgttggatctgtgtacattaaatcaaaggag
gctcctgctaaggatgttctcaaggaccttgtggagatgtgtcgtggcattcaacatcct
ctacgtgggctcttcttaaggagttatctttctcaagtcagtagggataaattacctgat
attggttctgaatatgaaggtgatgctgatactgtcatggatgctgtggagtttgtgctt
caaaactttacagaaatgaataaactttgggtgcggatgcagcaacagggacctgcccgg
gagaaagagaaacgggaaaaggaaaggagcgagcttcgtgaccttgttggcaagaaccta
catgttctcagtcaaatagagggtgttgaccttgatatgtacaaagatactgtgcttcca
agagtgttagagcaggttgttaattgtaaagatgagcttgcccagtattacttgatggac
tgcataatccaagtctttcctgatgagtaccacttgcagactcttgagacgttactgggt
gcctgccctcagcttcagccaactgttgacatcaagacagtgctctcccaactaatggag
agactatcaaactatgctgcttcgagtgcagaagttttgcctgaattcttgcaagtagaa
gctttcaccaaattgagcaatgccattgggaaggtgattgaagcacaggttgacatgccg
gtagttggagctgtaactttatatgtgtctctcctgacatttactcttcgtgtccatcca
gatcgtcttgattacgtagaccaagttctgggagcatgtgtgaagaaactttctggtaaa
gcaagaattgaagatgccaaagcaacaaaacaaattgttgcactcctgagtgcaccattg
gagaaatacaatgatatagtgactgcactgaatctttctaactacccgctagtgatggat
caccttgataacgcaacaaataaagtgatggctgttgttattattcaaagcataatgaaa
aacaacacttacatttcaactgatgataaggttgaagccctgtttcaattgataaagggg
cttattaaagatttggatggatctcttgtcgaggagcttgatgaggaggattttaaagag
gagcaaaattctgttgcacgtcttatccacatgctgcataatgatgatccagaggagatg
ttaaagataatatgtaccgtgaggaagcatattctaactggaggaccaaaacgcttacca
ttcactgtccctcccctcattttttctgcactcaagttgattagacagttgcaaggtcag
gatggggatgtggttggagaagatgtgcctgcgacaccaaagaagatttttcagctcctg
aatcagactattgaggctctctcatctgttccatcacctgaattagcattaagattatac
ttgcaatgtgcagaggctgccaatgactgtgatcttgaacctgttgcatatgaattcttc
actcaagcatttatactgtatgaagaagaaattgcggattctaaagcccaggtgactgca
atacacttaataataggaacccttcagaggatgaatgtatttggtgttgaaaacagggat
actttaacacacaaggctacagggtactcggcaaagcttttaaagaagcctgatcagtgc
aaagcagtttatgcgtgttcacatctcttctgggtagatgatcaggatggtgtgaaggat
ggagaaagggtcctactttgcctaaagcgtgctttaaggattgcaaatgctgcccaacag
atggctaatgttacacggggtagcagcggacctgtcacactctttgttgagatactgaac
aagtacctctacttctttgaaaaggggaacccgcaaattactagtgcagcaatccagggt
ctaatcgagctaataacaaatgagatgcaaagcgacaccacaacagatccatttgcagat
gctttctttgccagcagcctccgctacattcagttccaaaagcagaaaggtggtggtatg
ggtgaaaaatacgagtccatcaaggtgtga
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