Nelumbo nucifera (sacred lotus): 104604257
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Entry
104604257 CDS
T04131
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
nnu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104604257
03083 Polycomb repressive complex
104604257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104604257
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104604257
Histone modification proteins
HAT complexes
HATB complex
104604257
HDAC complexes
Sin3A-HDAC complex
104604257
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104604257
PRC2.2
104604257
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104604257
Heterochromatin formation proteins
Other heterochromatin formation proteins
104604257
Chromatin remodeling factors
NuRD complex
104604257
NuRF complex
104604257
NuRF complex (fruit fly)
104604257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD_LRWD1
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
104604257
NCBI-ProteinID:
XP_010266834
UniProt:
A0A1U8AV74
LinkDB
All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
MGEEQEMGDEQVAEEFSVWKKNTPFLYDLVISHALVWPSLTVQWLPSLPQTDAEDASFAV
HKLILGTHTSDDAPNSLMIADVHLPLPPDNSSEIDNSQPSKSLTIPKVEVTQEIRVDGEV
NRARHMPQNASLVAAKTSGSDLYVFNCTKHPAKHQGGPCDPDLRLRGHTKEGYGLSWSPF
KEGYLLSGSNDSKICLWDISKMPKDKVLEAMHICEVHEDVVEDVAWHLKNENLFGSVGDD
RRLMIWDMRSSLLNKPQQSLLAHEKEVNYLSFNPFNEWILATASSDTTINLFDLRKLTTA
LHSFSAHMEEVFQVEWSPHHETVLASSANDRRLMIWDLNRIGDEQSEGDAEDGPPELLFS
HGGHTSKISDFSWNQNEPWVISSVAEDNILQVWKMSESIY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagagcaggagatgggagatgaacaggtggcggaggagttttctgtatggaag
aagaacacacctttcttatacgatctggtcatctctcatgccctcgtatggccatcgctc
accgttcagtggctcccttctttgccccaaaccgacgccgaagacgcatccttcgccgtg
cacaagctaatcctcgggacccacacatcagacgacgctccgaactccctcatgatcgcc
gacgtgcacctccctcttcctccagacaactcctccgaaatcgacaactctcagccctcc
aaaagcctcaccatccccaaggttgaggttacacaagagatacgtgttgatggagaagtt
aatcgtgctcgacacatgccgcaaaatgcctctcttgttgcggctaaaactagtggttcc
gatttgtatgttttcaactgcaccaaacacccagcaaaacatcaagggggtccgtgtgat
cctgatttgcgattgaggggtcacactaaagaaggttatggcttatcttggagtcctttc
aaagagggctaccttcttagtggttcaaatgactccaaaatatgcttgtgggatatctct
aaaatgcctaaagataaagtgcttgaggcgatgcatatatgcgaggttcacgaggatgtg
gtggaagatgttgcatggcacttgaagaatgaaaatttatttgggtcagtaggggatgat
cgacggttgatgatttgggatatgagatcgtctttgttgaacaaaccgcaacaatcactt
ttagctcatgagaaagaggtgaactatttatcgttcaatccatttaatgaatggattctg
gcaacagcatcttcagacaccaccattaatctatttgatttgcggaagctaacaacagca
ttacatagcttttctgcacacatggaggaggtattccaggttgagtggagccctcaccat
gaaactgtcttggcatcttctgctaatgacaggaggttgatgatttgggatcttaacagg
attggagacgagcagtctgaaggagatgctgaggatgggcctcctgagcttctcttttct
cacggcggtcacacatctaagatttcggatttctcatggaatcaaaatgaaccctgggtt
atatcaagtgtagctgaggacaacatccttcaagtctggaagatgtcagaaagcatttat
taa
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integrated database retrieval system
