Nelumbo nucifera (sacred lotus): 104604387
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Entry
104604387 CDS
T04131
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104604387
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nnu01009
]
104604387
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104604387
Protein phosphatases and associated proteins [BR:
nnu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104604387
Spliceosome [BR:
nnu03041
]
Common components
Common spliceosomal components
SR proteins
104604387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
RRM_5
PRP38_assoc
JIP4_N
Motif
Other DBs
NCBI-GeneID:
104604387
NCBI-ProteinID:
XP_019054489
UniProt:
A0A1U8Q6Q0
LinkDB
All DBs
Position
Un
AA seq
224 aa
AA seq
DB search
MADSPRKRYSRSPSPPLRARSRSRSRSRSRPRSRSQSRSRSGSRGRDNASNPGNTLYVTG
LSTRVTERELEDHFSKEGKVISCRLVVEPRSRASRGFAFVTMDTIEDADRCIKHLNQSVL
EGRYITVEKSRRKRPRTPTPGNYLGVKSSRESGYRGDRGRYRGRDDYGYRRSPRRSPYRG
GRDYSPRRSPYGGRSKRERSRSLPYSPYGSPERGYGRRPNVYAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgcctcgtaaaaggtattcaagatctccttccccccctttgagagcacga
tcaaggtctagatccagatctaggtcaaggcctaggtcccgatcccagtccagatcaagg
tctggaagtcgtggaagggataatgcttcaaatcctggcaatacactctatgtgactggt
ctgtctacaagggtcacggaaagagagcttgaggatcatttctcaaaagagggaaaggta
atttcatgtcgtctggttgtggaacctcgttcacgtgcatcacggggttttgcctttgtt
actatggacacgatcgaggatgcggaccgctgcatcaagcatttgaaccagtcagttttg
gaaggccggtacataactgttgagaagtcaaggaggaagcgcccaaggacacctacacct
ggaaactatcttggggtgaaaagcagcagagaatcaggctatcgaggtgatcgtggtaga
taccgtggtcgtgatgactatgggtaccggcggtctccaaggcggtcaccatatcgagga
ggccgtgattattctcctcgacgctcaccttatggaggcagatcaaaaagagagcgctct
cgatctctaccctattctccttatggtagcccagaaagaggttatggccgtcgaccgaat
gtttatgcaagatag
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