KEGG   Nelumbo nucifera (sacred lotus): 104604572
Entry
104604572         CDS       T04131                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104604572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nnu03009]
    104604572
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104604572
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Utp12 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st DSE1_N Beta-prop_SCAP NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st ASA1 CFAP251_N Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_IP5PC_F PAC11 WDR54 Beta-prop_pof12 DUF7099 PALB2_WD40 Beta-prop_ACSF4 Beta-prop_EIPR1 PROPPIN Beta-prop_WDR19_1st Beta-prop_HPS5 CDtoxinA Rhamnogal_lyase Utp13
Other DBs
NCBI-GeneID: 104604572
NCBI-ProteinID: XP_010267274
UniProt: A0A1U8AWC2 A0A822ZWD4
LinkDB
Position
Un
AA seq 942 aa
MVKSYLRYEPVAVFGVVVSIESNISFDSSGKFLLTPALENLAIWNVRQGICSKALSPSPV
SHGPSLAVTAIASSDSSSIASGYADGSIRIWDCIKGTCEVTLNGHKGATTALRYNKLGSL
LASGSKDNDVIVWDVVGEAGLFRLRGHRDQVTDVVFLESGKKLVSSSKDKFLRVWDLETQ
HCMQIISGHHSEIWSIDVDPEERYLVTGSADPELRFYTIKHELVDRETSANSNGSEIVNN
GDDAAGNKWDVLKPFGEIQRQSKDRVATLRFNKSGSLLACQVAGKTTDIFRVLDEAESKR
KAKRRIHRKEKKSAKGAREVTENGDRNPVAGEEGNVPVVVSDVFKLLQTLRASKKICSIA
FSPIASKNSLATLALSLNNNLLEVYSVESSTSTKILSIELQGHRSDVRSVTLSSDNTLLL
STSHNAVKIWNPSTGSCLRTIDSGYGLCSSFVPGNRYAIVGTKSGTLEIINVGSGTCTEV
VEAHGGSIRSIATTPDGSGFVTGSADHDVKFWEYQIMQNPGQDSTHLTVANVRTLKMEDD
VLVVAVSPDAKYITVALLDCTIRVLFMDSLKNFLSLYGHKLPVLCMDISSDGDLLVSGSA
DKNLKIWGLDFGDCHKSIFAHADSVMSVQFVRNTHYVFSVGKDRLVKYWDADKFELLLTL
EGHHSEVWCLSISNRGDFVVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDNSF
ESRYAPKEDLPEEGAVGIAGKKTKETLTATDLIIDALDMAEEELKRMAQHTEENEGGKAT
DFLPNVMMLGISPSDYVLHAISNVHTNDLEQTLLSLPFSDALKLMSYLKDWASNPDRVEL
VCRIGTVLLQIHHNQLITTPAARPVLTVLKDILYARIKDCKDIIGFNLAAMDHLKQYLSL
KSDALFRDAKKKVEEIRLRQARRLEARMEPREEKRRKKKQKS
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggttaagtcctacctcagatacgagccggtcgcagtgtttggggtggtagtttcaatt
gaatccaacatcagcttcgacagctccggaaaattcctcctcacccctgcccttgaaaac
ctcgccatttggaatgttagacagggcatctgctctaaggccctctccccctctcccgta
tctcatggcccctcacttgccgtcactgccatcgcttcctctgactcctcttcgatagca
agtggttatgcggatgggagtataaggatttgggattgtattaaaggaacttgtgaggtc
acactgaatgggcataaaggtgcaactaccgctcttcgttacaataagcttggttctctg
ctcgcttccggaagcaaggataacgatgttatcgtgtgggatgtcgtcggcgaggccgga
cttttccgtcttcgtgggcaccgggatcaggtgaccgatgttgttttcttggaatccggt
aaaaagctagttagttcttccaaggacaagttcttgagagtgtgggatcttgaaacacaa
cattgtatgcaaataattagtggtcatcatagtgaaatttggtctatagatgttgaccca
gaggagagatatttggttactgggtcggcggatcccgaacttaggttttacacgataaag
catgagttggttgatagagaaacttccgcgaactcaaatggttctgaaattgtaaacaat
ggggatgatgctgctggaaacaaatgggacgtcttgaagccatttggtgaaatccagcgg
caaagcaaggatagggttgccactttgagatttaataagtctggaagtctacttgcatgt
caagtggctgggaagacaacagatatattcagggttttggatgaggctgaatccaagcgt
aaagctaagaggagaattcaccggaaagagaagaagtcagcaaaaggggctcgggaggta
accgaaaatggggacagaaatcctgttgctggagaagaaggaaatgtccctgttgtagtt
tctgatgtttttaagcttcttcaaactttacgtgctagcaagaagatatgctccattgct
ttctccccgattgcttcaaagaactcacttgccacactagcgttgtctctgaacaataat
ttgctggaggtgtattctgttgaaagcagcacatccacaaaaatcctttctattgagctt
caagggcaccgttccgatgttagaagtgttacactcagctcagataatactctcttgttg
tcaactagtcacaatgctgtaaagatatggaatccaagtactggttcttgccttcgtact
attgactctggatatggtctttgtagttcatttgttcctggtaaccggtatgcaattgtt
ggtactaaaagtgggacactggaaatcattaatgttgggagtggcacatgtactgaagtt
gtagaagctcacggtggctctatacggtcaattgcaacaactccagatggaagtggtttt
gtcacaggaagtgcagatcatgatgttaaattttgggagtatcagattatgcagaatcct
ggtcaggattctacgcacctcactgtggcaaatgtaaggactctgaaaatggaagatgat
gttcttgttgttgcagtgagtcctgatgccaaatacattactgttgccctgttggattgc
acaataagggtattatttatggactcactgaaaaacttcctctctctatatggtcacaaa
cttcctgtgctttgcatggatatttcatcagatggagatctattagttagtggttctgca
gataaaaatttgaagatttggggtctagattttggggattgtcacaaatctatttttgct
catgcagacagtgttatgtcagtgcaatttgtgcgtaatacccattatgtgtttagtgtg
gggaaagatcgccttgttaaatactgggatgctgataaatttgagttgcttttgactctt
gaagggcaccattctgaagtttggtgtctctcaatcagcaaccgaggtgattttgttgta
acaggatcccatgacagatctatacgtcgttgggaccgcactgaagaacccttctttatt
gaggaagagaaagagaaaaggttggaagagatgtttgagtctgaccttgacaactcattt
gagagtagatatgcaccaaaggaagacctcccagaagagggagctgtgggcatagcaggg
aagaaaacaaaggagacccttactgcaactgatttgattattgatgcattagacatggca
gaggaagagttgaaacgaatggctcagcatacggaggagaacgagggtggaaaggcaact
gattttcttccaaatgttatgatgcttggtatctctccatctgattatgttcttcatgca
atttcaaatgttcacaccaatgatctggagcagacactgctgtccttaccattttcagat
gccttgaagcttatgtcttacttgaaggattgggcttccaatcctgatagggtcgagctt
gtttgcaggattggtacagttctcttgcaaatacatcataaccaattgattactactcct
gctgccaggcctgtcttgactgttcttaaagacattctttatgcaagaattaaggattgt
aaagatattattggttttaatcttgcagcaatggaccatctcaagcaatacttgtctttg
aaatctgatgctctattccgagatgccaagaaaaaggtagaagaaatccgtttacgacaa
gcaagacgtctggaagcaagaatggagccaagagaagagaagaggagaaagaagaaacag
aagagctga

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