Nelumbo nucifera (sacred lotus): 104604572
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Entry
104604572 CDS
T04131
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104604572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104604572
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104604572
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Utp12
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_SCAP
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ASA1
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_IP5PC_F
PAC11
WDR54
Beta-prop_pof12
DUF7099
PALB2_WD40
Beta-prop_ACSF4
Beta-prop_EIPR1
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_HPS5
CDtoxinA
Rhamnogal_lyase
Utp13
Motif
Other DBs
NCBI-GeneID:
104604572
NCBI-ProteinID:
XP_010267274
UniProt:
A0A1U8AWC2
A0A822ZWD4
LinkDB
All DBs
Position
Un
AA seq
942 aa
AA seq
DB search
MVKSYLRYEPVAVFGVVVSIESNISFDSSGKFLLTPALENLAIWNVRQGICSKALSPSPV
SHGPSLAVTAIASSDSSSIASGYADGSIRIWDCIKGTCEVTLNGHKGATTALRYNKLGSL
LASGSKDNDVIVWDVVGEAGLFRLRGHRDQVTDVVFLESGKKLVSSSKDKFLRVWDLETQ
HCMQIISGHHSEIWSIDVDPEERYLVTGSADPELRFYTIKHELVDRETSANSNGSEIVNN
GDDAAGNKWDVLKPFGEIQRQSKDRVATLRFNKSGSLLACQVAGKTTDIFRVLDEAESKR
KAKRRIHRKEKKSAKGAREVTENGDRNPVAGEEGNVPVVVSDVFKLLQTLRASKKICSIA
FSPIASKNSLATLALSLNNNLLEVYSVESSTSTKILSIELQGHRSDVRSVTLSSDNTLLL
STSHNAVKIWNPSTGSCLRTIDSGYGLCSSFVPGNRYAIVGTKSGTLEIINVGSGTCTEV
VEAHGGSIRSIATTPDGSGFVTGSADHDVKFWEYQIMQNPGQDSTHLTVANVRTLKMEDD
VLVVAVSPDAKYITVALLDCTIRVLFMDSLKNFLSLYGHKLPVLCMDISSDGDLLVSGSA
DKNLKIWGLDFGDCHKSIFAHADSVMSVQFVRNTHYVFSVGKDRLVKYWDADKFELLLTL
EGHHSEVWCLSISNRGDFVVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDNSF
ESRYAPKEDLPEEGAVGIAGKKTKETLTATDLIIDALDMAEEELKRMAQHTEENEGGKAT
DFLPNVMMLGISPSDYVLHAISNVHTNDLEQTLLSLPFSDALKLMSYLKDWASNPDRVEL
VCRIGTVLLQIHHNQLITTPAARPVLTVLKDILYARIKDCKDIIGFNLAAMDHLKQYLSL
KSDALFRDAKKKVEEIRLRQARRLEARMEPREEKRRKKKQKS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtcctacctcagatacgagccggtcgcagtgtttggggtggtagtttcaatt
gaatccaacatcagcttcgacagctccggaaaattcctcctcacccctgcccttgaaaac
ctcgccatttggaatgttagacagggcatctgctctaaggccctctccccctctcccgta
tctcatggcccctcacttgccgtcactgccatcgcttcctctgactcctcttcgatagca
agtggttatgcggatgggagtataaggatttgggattgtattaaaggaacttgtgaggtc
acactgaatgggcataaaggtgcaactaccgctcttcgttacaataagcttggttctctg
ctcgcttccggaagcaaggataacgatgttatcgtgtgggatgtcgtcggcgaggccgga
cttttccgtcttcgtgggcaccgggatcaggtgaccgatgttgttttcttggaatccggt
aaaaagctagttagttcttccaaggacaagttcttgagagtgtgggatcttgaaacacaa
cattgtatgcaaataattagtggtcatcatagtgaaatttggtctatagatgttgaccca
gaggagagatatttggttactgggtcggcggatcccgaacttaggttttacacgataaag
catgagttggttgatagagaaacttccgcgaactcaaatggttctgaaattgtaaacaat
ggggatgatgctgctggaaacaaatgggacgtcttgaagccatttggtgaaatccagcgg
caaagcaaggatagggttgccactttgagatttaataagtctggaagtctacttgcatgt
caagtggctgggaagacaacagatatattcagggttttggatgaggctgaatccaagcgt
aaagctaagaggagaattcaccggaaagagaagaagtcagcaaaaggggctcgggaggta
accgaaaatggggacagaaatcctgttgctggagaagaaggaaatgtccctgttgtagtt
tctgatgtttttaagcttcttcaaactttacgtgctagcaagaagatatgctccattgct
ttctccccgattgcttcaaagaactcacttgccacactagcgttgtctctgaacaataat
ttgctggaggtgtattctgttgaaagcagcacatccacaaaaatcctttctattgagctt
caagggcaccgttccgatgttagaagtgttacactcagctcagataatactctcttgttg
tcaactagtcacaatgctgtaaagatatggaatccaagtactggttcttgccttcgtact
attgactctggatatggtctttgtagttcatttgttcctggtaaccggtatgcaattgtt
ggtactaaaagtgggacactggaaatcattaatgttgggagtggcacatgtactgaagtt
gtagaagctcacggtggctctatacggtcaattgcaacaactccagatggaagtggtttt
gtcacaggaagtgcagatcatgatgttaaattttgggagtatcagattatgcagaatcct
ggtcaggattctacgcacctcactgtggcaaatgtaaggactctgaaaatggaagatgat
gttcttgttgttgcagtgagtcctgatgccaaatacattactgttgccctgttggattgc
acaataagggtattatttatggactcactgaaaaacttcctctctctatatggtcacaaa
cttcctgtgctttgcatggatatttcatcagatggagatctattagttagtggttctgca
gataaaaatttgaagatttggggtctagattttggggattgtcacaaatctatttttgct
catgcagacagtgttatgtcagtgcaatttgtgcgtaatacccattatgtgtttagtgtg
gggaaagatcgccttgttaaatactgggatgctgataaatttgagttgcttttgactctt
gaagggcaccattctgaagtttggtgtctctcaatcagcaaccgaggtgattttgttgta
acaggatcccatgacagatctatacgtcgttgggaccgcactgaagaacccttctttatt
gaggaagagaaagagaaaaggttggaagagatgtttgagtctgaccttgacaactcattt
gagagtagatatgcaccaaaggaagacctcccagaagagggagctgtgggcatagcaggg
aagaaaacaaaggagacccttactgcaactgatttgattattgatgcattagacatggca
gaggaagagttgaaacgaatggctcagcatacggaggagaacgagggtggaaaggcaact
gattttcttccaaatgttatgatgcttggtatctctccatctgattatgttcttcatgca
atttcaaatgttcacaccaatgatctggagcagacactgctgtccttaccattttcagat
gccttgaagcttatgtcttacttgaaggattgggcttccaatcctgatagggtcgagctt
gtttgcaggattggtacagttctcttgcaaatacatcataaccaattgattactactcct
gctgccaggcctgtcttgactgttcttaaagacattctttatgcaagaattaaggattgt
aaagatattattggttttaatcttgcagcaatggaccatctcaagcaatacttgtctttg
aaatctgatgctctattccgagatgccaagaaaaaggtagaagaaatccgtttacgacaa
gcaagacgtctggaagcaagaatggagccaagagaagagaagaggagaaagaagaaacag
aagagctga
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integrated database retrieval system