Nelumbo nucifera (sacred lotus): 104604610
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Entry
104604610 CDS
T04131
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104604610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nnu04131
]
104604610
Membrane trafficking [BR:
nnu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104604610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
zf_RING_Vps8
Beta-prop_EML_2
Beta-prop_HPS5
WDR55
EIF3I
PEP5_VPS11_N
zf_RING_Vps8_fungal
Beta-prop_WDR11_2nd
zf-RING_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
104604610
NCBI-ProteinID:
XP_010267348
UniProt:
A0A1U8AVT1
LinkDB
All DBs
Position
Un
AA seq
967 aa
AA seq
DB search
MSQNLAENGIDGDDEREEEEEDYEEEAEDEDEEEGEEEEEEEEEEEEPRLKYQRMGGSIP
SLLSNDAASCIAVAERMIALGTHDGTVHILDFLGNQVKEFSAHTATVNDLSFDTEGEYVG
SCSDDGNVVINSLFTDERMKFEYHRPMKAIALDPDYSSKSSQRFVAGGLAGHLYLNTKKW
IGFRDQVLHSGEGPIHAVKWRTSLIAWANDAGVKVYDTANNQRITFIERPRGSPRPELLL
PHLVWQDDTLLVIGWGTSVKIAAIRANQYTGANGVQRHIPVSSMKHVDIVGSFQTNYFIS
GIAPYGDALVVLAFIPEKEDGEKNFNSTLPSRQGTAQRPEVRIVTWKNDELATDALPVYG
FEHYKAKDYSLAHSPFSGSSYAGGQWAAGDEPLYYIVSPKDVIIAKPRDAEDHIAWLLQH
GWHEKALAAVEAGQGRTELLDEVGSRYLDHLILERKYAEAAMLCPKLLRGSASSWERWIF
HFAQLRQLPVLVPYIPTENPRLRDTAYEVALVALATNPSFHKDLLATVKSWPPVIYSALP
VISAIEPQLNTSSMTETLKEALAELYVINEQYEKSLALYADLMKPDIFDFIDKHNLHDAI
SDKVVQLMLVDCRRAVSLLIQHRGLITPSEVISQLLDTSNKCDSRYFLHLYLHSLFEVNP
HAGKDFHDMQVELYAEYDPKMLLPFLRSSQHYTLEKAYDICVKRDLLREQVFILGRMGNS
KQALAIIINKLEDIEEAIEFVSMQHDDELWEELIKQCFNKPEMVGVLLEHTVGNLDPLYI
VNMVPNGLRIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKFYKEARHGVYLG
SGEEEGRTSRNKSRATEVAEKTSSMKSVELKSKTRGGGRCCMCFDPFSIQNVSVIVFFCC
HAYHLSCLMDSTNSASHKSGSRATPKEPASNYEYNYDYDDDSDDDSDETNQSGAYRMRCI
LCTTAAG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaatctcgcagaaaacggcatcgatggggatgatgagagggaagaagaggag
gaagactacgaagaagaagctgaggatgaagacgaggaggagggggaggaagaggaggag
gaagaagaagaagaggaggagccgaggctcaagtaccagagaatgggagggagcatccct
tcgcttctctcaaacgatgccgcctcttgtattgctgttgctgagcgtatgatcgctctt
ggtacccatgacggcaccgttcatatacttgattttctgggcaatcaggttaaggaattc
tctgctcacactgctaccgtcaatgatcttagctttgatacagaaggtgaatatgtggga
agctgttctgatgatggaaatgttgttataaacagcctttttacagatgaaagaatgaag
tttgagtatcatcgcccaatgaaggctattgctctggacccagattattcaagcaaatca
tcacagaggtttgtcgctggtggtctagcaggacatctttatctaaacacaaagaaatgg
ataggcttccgtgaccaggttctacattctggcgaaggaccaatacatgctgtgaagtgg
aggacaagtcttattgcttgggccaatgatgcaggtgtgaaagtttatgacacagccaat
aatcagagaattacttttattgagcggccacgaggaagcccacgtcctgagctgttgctt
cctcatttagtttggcaggatgatactcttttggttattggttggggaacatcagtaaaa
attgctgccataagagcaaatcaatatacaggagccaatggggtacaaaggcacatacca
gtatccagtatgaagcatgtggatattgtgggatcttttcaaaccaactatttcatttca
ggaattgctccatatggtgatgctttggttgttctagcttttattcctgagaaagaggat
ggtgaaaaaaactttaacagtactcttccatcacgccagggaactgcacagaggcctgaa
gtacgcatagtcacatggaaaaatgatgaacttgcaacagatgctttacctgtgtatggg
tttgagcattacaaggcaaaggattattcccttgcacattctcctttctcaggtagcagt
tatgcaggtggtcagtgggctgctggagatgaaccattgtactacattgtctcccctaag
gatgtaattatcgcaaagcctagggatgctgaagaccacattgcttggcttcttcaacat
ggatggcatgaaaaagcattggctgcagttgaagcaggacaggggcggacagagcttctt
gatgaggtgggatcaagatatctagatcatttgattttggaaaggaaatatgctgaagct
gcaatgttgtgtccaaagttgttacgtggatctgcttcttcatgggagaggtggattttc
cactttgctcaacttcgccagcttcctgtgttggttccatacatcccaacagaaaaccca
agattgcgtgatactgcttatgaggtggcacttgtagccctggcaacgaatccatctttt
cacaaggacctcttggcaactgttaaatcctggccaccagtaatatattctgcattgcct
gtgatatcagcaatagaacctcagcttaatacttcatctatgactgagactctcaaagag
gcattggcggagttatatgtaatcaatgaacaatatgagaaatctcttgcattatatgcc
gatcttatgaagcctgatatatttgacttcatcgacaaacataatttgcatgatgccatt
tctgacaaggttgtccaactaatgttagtggattgcagacgtgcagtctctttactgatc
caacataggggtttgattactccatctgaagtgatttcacaacttttagataccagtaat
aagtgtgattccagatacttcttacacttgtatcttcattcactgttcgaagttaatcca
catgctggaaaggacttccatgatatgcaggtggagctctatgcagagtatgatccaaag
atgctgcttccttttcttcgtagtagtcagcactatacactagagaaggcatatgatatc
tgtgtcaaaagagatcttctgagagaacaggtttttatccttggaaggatggggaattca
aaacaagcccttgccattatcattaacaagttagaggacatagaagaggcaatagagttt
gtgtcaatgcagcatgatgatgaactttgggaagaactaattaaacagtgttttaataag
cctgagatggtgggtgttttgttggagcacactgttggtaatcttgacccactttatatt
gtaaatatggtgcctaatggtttaaggatacccaggcttcgagatcgcttagtcaaaatc
atcacagattacagaacagaaacttctcttagacatggatgcaacgatatccttaaggca
gactgtgttaacctcttggtcaagttttataaggaagcgcggcatggagtttatttgggt
agtggagaagaggaaggacggacaagcaggaataaaagtagagctactgaagtagctgag
aaaacatcaagcatgaaatctgttgagttgaaatcgaaaacaaggggtggtggaaggtgt
tgcatgtgctttgatcccttctctatccagaatgtctcagttatagtattcttttgctgt
catgcatatcacctctcatgtctcatggactccacaaattctgctagtcataagagtggg
tcccgagccactcccaaggaacctgcatcgaattatgaatataattatgattatgacgac
gacagcgatgatgacagcgacgaaactaaccagtctggtgcatatcggatgcgttgtatt
ttatgtactacagctgcagggtga
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integrated database retrieval system
