Nelumbo nucifera (sacred lotus): 104605372
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Entry
104605372 CDS
T04131
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104605372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104605372
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104605372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
NOL9_C
Motif
Other DBs
NCBI-GeneID:
104605372
NCBI-ProteinID:
XP_010268411
UniProt:
A0A1U8AQA5
A0A822ZLA4
LinkDB
All DBs
Position
Un
AA seq
344 aa
AA seq
DB search
MEIAKSDEIQDIHELQEDQWEERTLNLLADSKIDQEFSAAKSQKRGRRKHSLKWMRTPMA
IPEVILELQEEKLRETALRCLSTFLIERREEDPENYYRTGFLLYHSCGTMAILVQEMVAF
FQKMTDGSLNIRSSKRLANVITLLQSIAANHETRWKLVKSRVPNFLVPLILFQSPLEVFH
NVRAVALSVIGILCQTRDRKVIKWAIESNMVGICQISIKNGNELSKVIGMHILEAILQDW
SGICYICSPRNNHLLGLMETWDNLVALLAVYQDFSPRLLFHIIRCYVLLCNHMRGFNIVM
AKLPKPLLDGSFQDMLEEFPVIRSLLHHLLLTIGNAENCFLTTP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagcaaaaagcgatgaaattcaagacattcacgagctccaggaggatcaatgg
gaagaaagaacccttaatcttcttgcagactcgaagatcgaccaagaattttcggcggct
aaatcccagaagagggggcgaagaaagcacagcctgaaatggatgagaactccaatggcg
atccctgaagttattcttgagcttcaagaggaaaaactcagggaaacagctttgcgatgc
ctcagtactttcttaatcgagcggagggaagaagatccggagaactattatagaactgga
ttcttgctttatcattcctgtggtacaatggccatcttagtgcaggaaatggttgcattt
tttcaaaagatgacagatgggagtcttaatataagatcttctaagcgtcttgcaaatgtt
atcacccttttacagagcattgctgctaaccatgaaacaaggtggaaacttgtcaaatct
cgtgtgccaaacttcttggtacctctgatactgtttcagagcccattggaggtatttcat
aatgttcgagcagttgcactttctgtcattgggattttatgccagactagagatcggaag
gtcatcaaatgggctattgaaagcaacatggtgggaatctgtcagatatccataaagaat
ggaaatgaactctccaaagtgattggaatgcacatattggaagcaatactgcaagattgg
tcagggatatgctacatttgcagtccaaggaacaaccatctgctaggattgatggaaaca
tgggataatctggttgctcttttggctgtgtatcaagatttctctcctcgactcctcttt
cacattattagatgctatgttcttctctgcaatcatatgaggggatttaatattgtgatg
gcaaaacttcccaagccacttttggatggttccttccaagacatgctagaggagttccca
gtaattcggagtttgcttcaccatttgctgctaaccattggcaatgccgagaattgcttc
cttacaactccctag
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