Nelumbo nucifera (sacred lotus): 104605404
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Entry
104605404 CDS
T04131
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03420
Nucleotide excision repair
nnu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104605404
09124 Replication and repair
03420 Nucleotide excision repair
104605404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nnu03051
]
104605404
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104605404
Proteasome [BR:
nnu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104605404
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104605404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
UBA_3
MmeI_C
TECR_N
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
104605404
NCBI-ProteinID:
XP_010268452
UniProt:
A0A1U8AM47
LinkDB
All DBs
Position
Un
AA seq
387 aa
AA seq
DB search
MKLTVKTLKGTHFEIRVQPGDTIMAVKKTIEDVQGKDSYPCGQQLLIHNGKVLKDETTLE
DNKVSEDGFLVVMLSKTKALGSSGASSAQPATSAPAAAPTPAPVAAPTPAPVAAPEAPSQ
APAPVNVAAASERPTTEVPASNVYGQAASNLVAGNNLEQTIQQIMDMGGGIWDKETVTRA
LRAAYNNPERAVDYLYSGIPESTEVAVPVAHFPSIQAPDRPNPTNDTGVAGTAPVSGLPN
SSPLNLFPQETLNSGAVGDGSLDFLRNNQQFQALRSMVQANPQILQPMLQELSKQNPQLL
RLIQEHHAEFLQLINEPLEGSEGDLFDQPEQDMPHAISVTPAEQEAIERLEAMGFDRALV
IEAFLACDRNEELAVNYLLENAGDFED
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactgtaaagacattgaaaggcacccactttgaaatccgggttcagcccggc
gatacgattatggcggtaaagaaaactattgaggatgtacaaggaaaagacagctatcca
tgtgggcagcaattgttgatccataatgggaaggttttgaaagatgaaaccacattggaa
gacaacaaagttagtgaagacggttttcttgttgtcatgctcagcaagaccaaagccttg
ggatcatctggggcctcgtctgctcagcctgcaacaagtgctccagcagctgcacctaca
ccagctccagttgctgcacctacaccagctccagttgctgcacctgaggctccttcacag
gcaccggccccagtaaacgttgcagctgcatctgagagaccaacaactgaggttcctgca
tctaatgtctatggacaagctgcatcaaatttagttgctggtaataatcttgagcagact
attcaacaaataatggatatgggtggtggcatctgggacaaggagactgttacacgtgca
cttcgtgcagcttacaacaatcctgagcgagctgtggattatttatattctggtattccg
gaatcaacggaggtcgctgtcccagtggctcacttcccttctattcaggcaccagatagg
cctaacccaacaaatgacactggtgtagcagggactgcacctgtatctggtctacctaat
tcttctcccctcaacttgtttcctcaggagacgctcaattctggtgctgttggtgatgga
tcccttgatttcctcagaaacaaccagcagttccaagcattgcgttcaatggttcaagca
aatccacaaattctacagccaatgcttcaagagctaagcaagcaaaaccctcaacttcta
agactaattcaggagcaccatgctgagtttcttcagttaataaatgaacccctcgaaggt
tctgaaggggatctgtttgatcaacctgagcaagatatgccccatgccatcagtgtgaca
ccggcagaacaggaggctattgaacgtcttgaagcaatgggatttgatagagctcttgtc
attgaggcatttttagcttgtgaccgtaatgaggaattagcagtcaattacttactggag
aatgctggagactttgaagactga
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