Nelumbo nucifera (sacred lotus): 104605803
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Entry
104605803 CDS
T04131
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03410
Base excision repair
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104605803
03410 Base excision repair
104605803
03420 Nucleotide excision repair
104605803
03430 Mismatch repair
104605803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnu03032
]
104605803
03036 Chromosome and associated proteins [BR:
nnu03036
]
104605803
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104605803
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104605803
DNA Replication Termination Factors
ELG1-RFC complex
104605803
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104605803
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104605803
Check point factors
HRAD17(Rad24)-RFC complex
104605803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
Rad17
RuvB_N
AAA_5
Mg_chelatase
AAA_16
AAA_14
nSTAND3
AAA_11
SLFN-g3_helicase
nSTAND_NTPase5
AAA_2
AAA_assoc_2
AAA_24
ResIII
PhoH
AAA_19
AAA_18
AAA_7
AAA_28
AAA_30
RNA_helicase
AAA_25
NPHP3_N
TIP49
Parvo_NS1
AAA_17
DUF815
bpMoxR
NB-ARC
DNA_pol3_gamma3
CPG4
Motif
Other DBs
NCBI-GeneID:
104605803
NCBI-ProteinID:
XP_010269005
UniProt:
A0A1U8AZP3
LinkDB
All DBs
Position
Un
AA seq
344 aa
AA seq
DB search
MAPVVPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGGRQGGHPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMS
SRIVHICREEGLNLDSEAFSTLSSISQGDLRRAITYLQGAARLFGSSISAKDLISVSGVI
PQDAVQALLASCRSGDFELANKEVSNVISEGYPVSQMLSQFCQLFEVIVEANDISDEQKA
RICKRLAEADKCLVDGADEYLQLMDVASNTMRALCNMPMEFSYE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgtagttccgagctcgcagccgtgggtggagaaatatcgaccaaagcaagtg
aaggacgtagctcaccaggatgaggttgttcgggttctaaccaataccctcgagactaca
aattgcccacacatgcttttctatggccctccggggacgggcaagacaacaactgccctc
gctattgctcacgagttatttggacctgaactttacaagtctagagtactggagctaaat
gcaagtgatgaccgtgggatcaacgtagtacgaactaagattaaagattttgcagctgtt
gctgtaggctctggtggccgtcaagggggtcatccttgcccaccctacaagatcataatc
ctagatgaagccgactcaatgacagaagatgctcagaatgccttgcgacgtactatggaa
acctactctaaggtcacacgattcttcttcatttgtaactacattagcaggatcattgag
ccacttgcttccaggtgtgcaaagtttaggttcaagccactctccgaagatgtcatgagt
agtcgaatagtgcatatttgtagagaagaaggtctcaatctggactcagaggctttttca
accttgagtagcatttctcaaggtgatcttcgtcgggccataacgtacttgcagggagct
gctcgcttatttggttcatctatttctgccaaggacctaattagtgtatctggggtaatt
ccacaagatgctgttcaggctctattagcatcatgtagaagtggtgattttgagttggcc
aacaaggaagtcagtaatgtaatttcagagggatatccagtttctcagatgctttctcag
ttctgccagttgtttgaggtgattgtagaagcaaatgatatatcagatgaacagaaggca
agaatctgcaagagattggctgaagcagacaagtgtctagttgatggagcggatgagtat
ctgcagcttatggatgtggcaagcaatacaatgcgagcactttgtaacatgccaatggag
ttctcatacgagtag
DBGET
integrated database retrieval system