KEGG   Nelumbo nucifera (sacred lotus): 104605908
Entry
104605908         CDS       T04131                                 
Name
(RefSeq) formin-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03013  Nucleocytoplasmic transport
nnu03015  mRNA surveillance pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104605908
  09122 Translation
   03013 Nucleocytoplasmic transport
    104605908
   03015 mRNA surveillance pathway
    104605908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104605908
   03041 Spliceosome [BR:nnu03041]
    104605908
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104605908
Spliceosome [BR:nnu03041]
 Complex C
  Other components
   EJC/TREX
    104605908
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 104605908
NCBI-ProteinID: XP_010269159
UniProt: A0A1U8AMV4
LinkDB
Position
Un
AA seq 649 aa
MSTEYPVLDNRPIDQWKVAELKEELKRRKITTKGLKDDLIRRLGEAIRNEGESVKEEVVN
GLSCDPEPEFKFEEKVAKPNDTQVVEESQDDGKNKTLEAENDVSEVGIDDGAAEMVQEKS
ETESLSKSDSVAAVHEPAIVTVSEEDSVTVSQIVETQLASNHQEPQNIEIQIESGVSNPP
HEDAVPNMSGPNNQVSEVSPVLGSQVKSESISTDSVSIIQKNELKDNLNTGNFPLELEVV
KPEMVQPSSSDVHPTGGDLHPLGDQEPCENRGPIEDIDDTNAPNLDLGKKNDGADAGSSE
KLNLERSSGGDSMEDDTLESKQIDSNQNSDGVGDRNELTVNEENVIDVVGAGFSSEKKES
PAENKIASAVPGEKRKVEDKDVGNNEPPKRQRRWNSESIKVPEVQTSNLTSSSTTPKDAL
QPTIPKRNFIRSDSTLSEEASKERVVPPSPKPPTTSLRIDRFLRPFTLRAAQELLAKTGN
VCSFWMDHIKTHCYVTYSSVEEAIETRNALYNLQWPSNGGRLLVAEFVDPQEVKMRVEAP
PESPAASASTNATAPTSPTLQPQPSPHQQNLRRQLPPPPLPPPPPITDPSTIRERLPLPP
PPPLPKKPDPPIVTLDDLFRKTRATPRIYYLPLSEEQVAAKVAARKNAK
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgtcgacagagtatcctgtacttgataataggccaattgatcaatggaaggtagcagaa
ctaaaagaagagcttaagagacggaaaattacaacaaaggggttgaaggatgacttgata
aggcgcttgggtgaagcgatacggaatgagggagaatctgtaaaggaagaagttgttaat
ggtctaagttgtgaccctgaacctgagtttaagtttgaagagaaggttgcaaagccaaat
gatactcaagttgttgaagagagtcaggatgatggtaaaaataaaaccttagaggcagaa
aatgatgtttctgaggttggtattgatgatggtgctgctgagatggtccaagagaaatct
gaaaccgagtcactgagtaagtctgattctgttgcggcagttcatgaaccggcaattgtt
acagtatctgaggaagatagtgtcacagtcagtcagattgtggaaacccaattagcatcc
aaccatcaggagccacagaacattgaaatccagatagagagcggggtttcaaatcctccc
catgaagatgcagtgcccaacatgtccggtccaaacaatcaggtatctgaggtcagccct
gttttagggtctcaagtaaagtctgagtctatttctactgattctgtgtcaattattcaa
aagaatgaactaaaggataatttgaatactggtaatttccctttagaactggaagttgtt
aagccggagatggtgcaaccatcatccagtgatgttcatcctacaggtggcgatctacat
ccactgggtgaccaagagccatgtgagaaccggggccctattgaagatattgatgatacc
aatgctccaaatctggaccttgggaagaaaaatgatggtgcagatgcggggtcctcagaa
aaattaaatttagaacgaagttcaggtggtgattctatggaggatgatacattggaaagt
aagcaaattgattcaaatcaaaattctgatggcgtgggagataggaatgagctaactgta
aacgaggaaaatgtaattgatgttgtgggtgctggtttctcttctgagaagaaggaaagt
cctgctgaaaataaaattgcttctgctgtgcctggtgaaaaaagaaaagttgaagataaa
gatgtagggaacaatgagcctccaaagaggcagcgtcgatggaactctgaaagcatcaaa
gttcctgaagtgcaaacttctaatctcacctcctcatctacaacacctaaagatgcttta
cagcccaccattcccaagcgcaacttcatcaggtctgactcaacacttagtgaagaggca
tcaaaggaacgagttgttccaccatcgccaaagcccccaactacttccctccgaattgac
cgttttcttcgtccatttacactaagggcagctcaggagcttcttgcaaaaactggaaat
gtatgcagcttctggatggaccatatcaagactcattgttatgtgacgtattcctcggtg
gaagaagccatagaaacacgaaatgctttgtacaatctgcaatggccttcaaatggaggg
cgccttttggtggcagaatttgtcgatccccaagaagtgaaaatgcgggttgaagctcct
ccagagtctccagcagcttctgccagcaccaacgcaacggcacccacttctccaacactt
cagccccagccatcccctcaccaacagaatctgcgacgacaacttcctccccctcctctc
ccaccaccacccccaataaccgacccgtccacaatacgggaacgtctccctcttccaccc
ccaccaccgcttccaaagaagccagacccacctatagttacccttgacgatctcttcagg
aaaacaagagcgacccctaggatatactacctaccattgtctgaagaacaggttgctgca
aaagttgctgctcgcaagaatgctaagtag

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