Nelumbo nucifera (sacred lotus): 104605908
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Entry
104605908 CDS
T04131
Name
(RefSeq) formin-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
nnu03015
mRNA surveillance pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104605908
09122 Translation
03013 Nucleocytoplasmic transport
104605908
03015 mRNA surveillance pathway
104605908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104605908
03041 Spliceosome [BR:
nnu03041
]
104605908
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104605908
Spliceosome [BR:
nnu03041
]
Complex C
Other components
EJC/TREX
104605908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
104605908
NCBI-ProteinID:
XP_010269159
UniProt:
A0A1U8AMV4
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Position
Un
AA seq
649 aa
AA seq
DB search
MSTEYPVLDNRPIDQWKVAELKEELKRRKITTKGLKDDLIRRLGEAIRNEGESVKEEVVN
GLSCDPEPEFKFEEKVAKPNDTQVVEESQDDGKNKTLEAENDVSEVGIDDGAAEMVQEKS
ETESLSKSDSVAAVHEPAIVTVSEEDSVTVSQIVETQLASNHQEPQNIEIQIESGVSNPP
HEDAVPNMSGPNNQVSEVSPVLGSQVKSESISTDSVSIIQKNELKDNLNTGNFPLELEVV
KPEMVQPSSSDVHPTGGDLHPLGDQEPCENRGPIEDIDDTNAPNLDLGKKNDGADAGSSE
KLNLERSSGGDSMEDDTLESKQIDSNQNSDGVGDRNELTVNEENVIDVVGAGFSSEKKES
PAENKIASAVPGEKRKVEDKDVGNNEPPKRQRRWNSESIKVPEVQTSNLTSSSTTPKDAL
QPTIPKRNFIRSDSTLSEEASKERVVPPSPKPPTTSLRIDRFLRPFTLRAAQELLAKTGN
VCSFWMDHIKTHCYVTYSSVEEAIETRNALYNLQWPSNGGRLLVAEFVDPQEVKMRVEAP
PESPAASASTNATAPTSPTLQPQPSPHQQNLRRQLPPPPLPPPPPITDPSTIRERLPLPP
PPPLPKKPDPPIVTLDDLFRKTRATPRIYYLPLSEEQVAAKVAARKNAK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagagtatcctgtacttgataataggccaattgatcaatggaaggtagcagaa
ctaaaagaagagcttaagagacggaaaattacaacaaaggggttgaaggatgacttgata
aggcgcttgggtgaagcgatacggaatgagggagaatctgtaaaggaagaagttgttaat
ggtctaagttgtgaccctgaacctgagtttaagtttgaagagaaggttgcaaagccaaat
gatactcaagttgttgaagagagtcaggatgatggtaaaaataaaaccttagaggcagaa
aatgatgtttctgaggttggtattgatgatggtgctgctgagatggtccaagagaaatct
gaaaccgagtcactgagtaagtctgattctgttgcggcagttcatgaaccggcaattgtt
acagtatctgaggaagatagtgtcacagtcagtcagattgtggaaacccaattagcatcc
aaccatcaggagccacagaacattgaaatccagatagagagcggggtttcaaatcctccc
catgaagatgcagtgcccaacatgtccggtccaaacaatcaggtatctgaggtcagccct
gttttagggtctcaagtaaagtctgagtctatttctactgattctgtgtcaattattcaa
aagaatgaactaaaggataatttgaatactggtaatttccctttagaactggaagttgtt
aagccggagatggtgcaaccatcatccagtgatgttcatcctacaggtggcgatctacat
ccactgggtgaccaagagccatgtgagaaccggggccctattgaagatattgatgatacc
aatgctccaaatctggaccttgggaagaaaaatgatggtgcagatgcggggtcctcagaa
aaattaaatttagaacgaagttcaggtggtgattctatggaggatgatacattggaaagt
aagcaaattgattcaaatcaaaattctgatggcgtgggagataggaatgagctaactgta
aacgaggaaaatgtaattgatgttgtgggtgctggtttctcttctgagaagaaggaaagt
cctgctgaaaataaaattgcttctgctgtgcctggtgaaaaaagaaaagttgaagataaa
gatgtagggaacaatgagcctccaaagaggcagcgtcgatggaactctgaaagcatcaaa
gttcctgaagtgcaaacttctaatctcacctcctcatctacaacacctaaagatgcttta
cagcccaccattcccaagcgcaacttcatcaggtctgactcaacacttagtgaagaggca
tcaaaggaacgagttgttccaccatcgccaaagcccccaactacttccctccgaattgac
cgttttcttcgtccatttacactaagggcagctcaggagcttcttgcaaaaactggaaat
gtatgcagcttctggatggaccatatcaagactcattgttatgtgacgtattcctcggtg
gaagaagccatagaaacacgaaatgctttgtacaatctgcaatggccttcaaatggaggg
cgccttttggtggcagaatttgtcgatccccaagaagtgaaaatgcgggttgaagctcct
ccagagtctccagcagcttctgccagcaccaacgcaacggcacccacttctccaacactt
cagccccagccatcccctcaccaacagaatctgcgacgacaacttcctccccctcctctc
ccaccaccacccccaataaccgacccgtccacaatacgggaacgtctccctcttccaccc
ccaccaccgcttccaaagaagccagacccacctatagttacccttgacgatctcttcagg
aaaacaagagcgacccctaggatatactacctaccattgtctgaagaacaggttgctgca
aaagttgctgctcgcaagaatgctaagtag
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