Nelumbo nucifera (sacred lotus): 104606018
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Entry
104606018 CDS
T04131
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104606018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104606018
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104606018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
zf-RING_12
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104606018
NCBI-ProteinID:
XP_010269327
UniProt:
A0A1U8B184
LinkDB
All DBs
Position
Un
AA seq
935 aa
AA seq
DB search
MEDDEGVFSASDSDLSDSSDEYREGKDDEVDNDEERSPAESPPSDEDRKSKNVAALLRGX
LVVRRQPLLPRVLSVSDGAAVARKPFKPPCTQRYSDQNEELARRLWARKRFVPWGSSRPA
LVPVTNRLSASSVVEKYVPEENVSLPPGVEPLVLWQPEESEGEYGNMTSIVVEPLLVRFL
RPHQREGVQFMFECVSGLSSSAGISGCILADDMGLGKTLQSITLLYTVLHQGFDGKPMVK
KAIIVTPTSLVSNWESEIKKWVGERVQLIALCESTRDDVVSGIDNFTRPNSPFQVLIVSY
ETFRMHSSKFDQSGSCDLLICDEAHRLKNDQTLTNRALAALSCRRRILLSGTPMQNDLEE
FFAMVNFTNPGILGDVAYFRRYYEAPIICGREPTATEEERKLGIERSAELSAKVNQFILR
RTNALLSNHLPPKIVEVVCCKLTPLQLELYNHFIHSKNVKRVISEEVKQSKILAYITALK
KLCNHPKLIYDTIRSGSPGTLGFEDCIRFFPPEMFSGRSGSWTGGDGVWVELSGKMHVLA
RLLAQLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDL
SKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL
STGTIEEKVYQRQMSKEGLQKVIQHEQMDNNKGQGNFLSTEDLRDLFTFHENVRSEIHEK
MNCTRCRTHALEIDDGPEIAREVEGVNSTHGVCHSGEGTSDIGGFAEIAGCLHKLKSSEK
QLGAPLEEDLESWGHHPFPMSVPDAIFQCSAGDEVTFVFTNQVDGKLTPVESVGRSKTQR
EVEQKEDSDSKAIRSQNSSLRQHLRLNPMVCSNGDPMRNPSIATLRPTTGASVKFLRTSL
KGTMHAQTKPKISNGNKLPLKRLSANSEEHDDDFM
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgaaggggtcttctcagcgtctgactccgacctcagcgattccagcgac
gagtaccgcgaaggcaaagatgacgaagttgacaatgatgaagagcgatctccggctgaa
tctcccccgtccgacgaagatcggaagtctaagaatgtagccgcacttctgaggggcarc
cttgttgttagaaggcagccactacttcctcgagtcctttcagtgtcagatggagcggcc
gtggctaggaaaccatttaagcctccatgcactcaacgatatagtgaccagaatgaagag
cttgctcgccgtctttgggctcgtaagagatttgtcccatggggttcttcaaggcccgca
ttggttccggtaaccaaccgcttgagtgcctcaagcgttgttgagaaatatgttccagag
gagaatgtgtctctgccgccaggggtagaacccttggtattgtggcaacctgaagaatct
gaaggtgaatatgggaacatgacatcaatagtggtggaacctttgcttgttcgtttcctt
aggcctcatcaaagagaaggagttcagttcatgtttgagtgtgtttctggattgtccagt
tctgcgggtatttcaggatgtattctagcagatgatatggggttgggaaagactttacag
tcaatcacattactatacactgttcttcatcagggatttgatgggaagccaatggttaag
aaggcaatcattgttactcccactagtctcgttagtaactgggagtcagaaattaagaag
tgggttggggaaagagttcaacttattgctctatgtgaaagtacccgtgatgatgttgtc
tctggtattgataatttcacaagacctaacagcccttttcaggtgctcattgtttcgtat
gagacattccggatgcattcatcaaagtttgatcaaagtggatcttgcgatcttctcata
tgtgacgaggcccataggctgaaaaatgaccaaacattaaccaatcgggcactagctgct
ctttcatgtagacggcgtattctattatcaggaactccaatgcagaatgacttggaagaa
ttttttgcaatggttaactttactaacccaggaattttgggggatgttgcctattttcgt
cgttactatgaggctccaatcatttgtggaagagaacctacagcaacagaagaagagaga
aaactaggcattgaacgttctgcagaattaagtgccaaagtaaatcagtttatcctgagg
aggacaaatgctctgttatcaaatcacttaccaccaaagatagttgaagttgtttgttgc
aagctgactcctctccaattagaactgtataaccattttatacattcgaaaaatgttaaa
cgggtaatttctgaggaggtgaagcagtcaaaaattttggcatatattacagcccttaaa
aagttgtgcaatcatccaaagcttatttatgatacaatcaggagtggaagtccaggtaca
ttgggatttgaggactgcatacgatttttcccaccagagatgttttctggcagatctgga
tcatggactggtggtgatggggtttgggttgaactctctggaaaaatgcacgtcctggct
agattactggcccaacttcgtcagaaaacagatgatcgcatagttcttgtttcaaactac
actcagactctggatctttttgctcaactgtgtcgtgaaaggcggtacccatacttgagg
cttgatggaaccacatctatcagtaaaagacaaaagttggtcaaccgttttaatgatcta
tcaaaggatgaatttgcctttcttttaagcagcaaggctggtggttgtggacttaatttg
ataggtggtaaccgccttgtgctttttgatcctgattggaacccggcaaatgataagcaa
gctgccgctagagtctggagagatggacaaaagaagagagtatacatctatagatttttg
agtactggaaccattgaagaaaaggtataccagcgtcagatgtcaaaggaaggccttcag
aaagttattcagcatgaacaaatggacaacaataaaggacaggggaattttctttcaaca
gaagacttacgtgatcttttcacatttcatgagaatgtgaggtctgagattcatgaaaag
atgaactgcactcgttgtagaacacatgcattagagatagatgatggtcctgagatcgca
agagaggttgaaggtgtcaattcaacacatggagtttgtcattctggtgaaggcacttca
gatataggtggatttgctgaaattgctggatgcttgcataagttgaaaagctcagagaag
cagcttggagcccctctagaagaagatctagaaagttgggggcatcatccttttccaatg
tcagtacctgatgcaatttttcaatgttctgctggtgatgaggtcacatttgttttcaca
aaccaagtggatggaaagcttacacctgttgaatcagtggggaggtcaaaaactcaaaga
gaggtagaacaaaaagaagactctgattcaaaggcgatccgtagtcaaaattcctcattg
cgtcaacatctacggctgaaccccatggtctgttccaatggagatcctatgaggaaccca
tcaattgccacattacggcccactacaggggcgtctgtaaaatttttgagaacgtctctg
aaaggcacaatgcatgcgcaaacaaagccaaaaatatctaacgggaataagttaccactg
aaaagattgtctgccaattctgaagaacatgatgatgattttatgtaa
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