Nelumbo nucifera (sacred lotus): 104606065
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Entry
104606065 CDS
T04131
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104606065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104606065
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104606065
mRNA cycle factors
Common to processing body (P body) and stress granule
104606065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
104606065
NCBI-ProteinID:
XP_010269415
UniProt:
A0A1U8Q7M1
A0A822YDG8
LinkDB
All DBs
Position
Un
AA seq
983 aa
AA seq
DB search
MMTVPMDNLSAPLSREHVQRLYNKNIGLENRRRKSAQARIPSDPNAWQQMRENYEAIILE
DHSFSEQHEIEYKLWQLHYRRIEELRAHLTAALGPSGSATSLSGKGPRPDRITKIRLQFK
TFLSEATGFYHDLILKIRAKYGLPLDYFSEDPENQIVLSKDAKKSADMKKGLLSCHRCLI
YLGDLARYKGNYGDGDSRARDYVAASSYYMQAASLWPSSGNPHHQLAILASYSGDDLVAI
YRYFRSLAVESPFSTARDNLIIAFEKNRQSYSQLPVDAKASGVKDVRGSAKGRGKEEARV
PSKDAKIEPSSTKERSGSIPEVYKVFCIRFVRLNGILFTRTSLETFGEVFSLVTSDFHEL
LSSGQEEDLNFGSDAAENGLAIVRLVAILIFTVHNVNREVDGQSYAEILQRSVLLQNAFT
AAFEFVGYVLERCIQLEDPSSSYLLPGILVFMEWLACRPDIAAGSDIEEKQASARSFFWN
HWISFMNKLVSCGSVSLVNDEDETCFFNMSRYDEGETGNRLALWEDFELRGFLPLLPAQL
ILDFSRKHSLGDGGNKEKKSRCQRIIAAGKALANVVQIDQQGVYFDQKLKKFVIGVETKI
FEDSLLACSDIAQSNSMKQVSSVQKNLNLDSVQSKPQLHMEGEDEEEVIVFKPTVADKPV
DGIVPKWASSETWEPVQVTSGSEYGTYAGSFSASANNLPLPVSLDPSSRLSAPFSNIDSE
HFQPINASSSKWLVEQQDSLANGLANLSFVSNGLIGKSELQDSFNVSQPSALSLPLPQPG
NIAAGSVFLSLTNAPETVIPSKFDSIMSSVTNVDNLTVKPSSALPANLRKNPVNRPGRHF
GPPPGFCPMPSKQVDDSLSGSDLKNENPLMDDYSWLDGYQLSTSTKATTQSSINHMTHAY
SHSNFKSSASMTEAISFPFPGKQVPSVHAQLENWKGWPEHQLQEHLKLYQGQQQQLHQQG
DKQSTSMPEQYQGQSLWTGRFFV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgttcctatggataacttgtcagctcctttgtcaagggagcatgttcaacgc
ctttacaacaagaatattgggctggaaaatagacgtcgaaagtcagcacaggcaagaatc
ccctctgatccaaatgcatggcaacagatgcgtgagaattatgaggccataatccttgaa
gatcattccttttctgagcagcatgaaatagagtataagctgtggcagttgcattacagg
agaattgaggagttgagagcacatttgactgctgctctaggtccttctggctcagctaca
tcactgagtgggaaaggtcctcgccctgatcgaattacaaaaatacgtttgcaatttaag
acctttctttctgaagcaactggattttaccatgatttaattttgaagatcagagcaaaa
tatgggttgcctttggattatttctctgaggatcctgagaatcaaattgttctgtcaaaa
gatgcaaagaaatccgctgatatgaagaaaggcttgttgtcctgtcaccgttgtctgata
tatttgggcgaccttgctcgttataaaggaaattatggagatggtgattccagagctcgt
gattatgtagctgcttcaagttattacatgcaagctgcctctctttggccatcaagtggc
aatcctcatcatcagcttgcaatattagcctcttattctggggatgatctggtggcaatt
taccggtactttcgtagcctagcggtggagagccctttttcaactgcaagggacaacttg
attattgcatttgagaagaatcgtcagagctactcacagttgcctgtggatgccaaagcc
tctggtgtcaaggatgtgcgtggctctgcgaaaggaagaggtaaggaagaagcaagggtt
ccatccaaagatgctaaaattgaacccagttccacaaaggaaagatctggtagcatacct
gaggtttataaagtattttgcattcgatttgtccgactaaatggtatcctcttcacacgt
acaagtttagaaacttttggagaagtcttctctttggttaccagtgatttccatgagctt
ctttcttctggacaagaagaagacctaaattttggttcagatgctgcagagaatggactt
gccattgttaggcttgttgccattctcatattcacggttcacaatgtgaatagggaggtt
gatggccaatcatatgctgagatcttacagcggtctgttttgcttcagaatgcatttact
gctgcttttgagtttgttggatacgttcttgaaagatgtatacagttggaggatccatct
tcaagttatcttttaccaggcattcttgtttttatggaatggttagcttgtcgtcctgac
attgctgctggcagtgatattgaggaaaagcaagcttctgctagatcgttcttctggaac
cattggatatcctttatgaacaaacttgtctcatgtggatctgtatcccttgttaatgat
gaagatgaaacttgctttttcaatatgagccggtatgatgaaggtgaaacaggtaatcgg
cttgcactatgggaggactttgagttgaggggattcttaccacttcttcctgcacaactc
attctggacttctcaaggaagcattccttaggtgatggtggcaataaggagaaaaagtca
cgttgccagaggattatagcagcaggaaaggctcttgcaaatgtggttcaaattgatcag
cagggggtttattttgatcagaagttgaagaaatttgttattggtgttgagacgaaaata
tttgaggacagccttcttgcttgttcagacattgctcaatctaacagtatgaaacaagta
agttccgtgcagaaaaatttaaatttggactctgtgcaatcaaaaccacagttacatatg
gaaggcgaagatgaagaagaggtgattgtattcaaaccaacagtggctgacaaacctgtg
gatgggattgttccaaagtgggcctcaagtgagacttgggaacctgtccaagttacttcc
ggatctgagtatggaacttatgctggttctttctcggcctctgctaacaatcttcccctg
cctgtttctctggatcccagttcacgactatctgcccctttttctaatattgactctgaa
cattttcaaccaatcaatgcaagttcctcaaagtggcttgtggagcagcaagattctctt
gctaatggtttggcaaacttgagctttgtaagcaacgggcttattggaaaatcagagttg
caagatagcttcaatgtttcacagccttctgctctttcacttcctcttccgcaacctggc
aacattgctgctggaagtgtgtttttgagtctgacaaatgctcctgaaactgtgatacca
tcaaagttcgattcaattatgtcctcggtaactaatgttgataacctgactgtgaagcca
tcatcagcattgcctgcaaatttgagaaagaatccagttaatagacctggtaggcatttt
gggcctccacctgggttttgccccatgccttctaagcaagtggacgactccttgtctggt
tcagatttgaagaatgagaatccactaatggatgactacagctggttagatggatatcag
ttgtcaacatcaaccaaagcaacaacacagagctccattaaccacatgacacatgcctat
tctcattccaattttaagagtagtgccagcatgactgaggcaattagctttccttttcct
ggaaaacaagttccaagtgtgcatgcccaactggaaaactggaaaggctggccggagcac
caactccaggagcatctgaaattatatcagggacagcagcaacagctacatcagcagggt
gacaagcaatctacatcaatgccagagcaataccaaggacagtctctctggacaggccgg
ttctttgtgtga
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