Nelumbo nucifera (sacred lotus): 104606160
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Entry
104606160 CDS
T04131
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03430
Mismatch repair
nnu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104606160
03460 Fanconi anemia pathway
104606160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104606160
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104606160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104606160
NCBI-ProteinID:
XP_010269534
UniProt:
A0A1U8B1T7
LinkDB
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Position
Un
AA seq
944 aa
AA seq
DB search
MEGVASVDSPTIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGASSIEIALKEYGE
ESFKVIDNGCGISPNNFKVLALKHHTSKIADFPDLQSLATFGFRGEALSSLCALGKLTVE
TRTKSEPAATHLTFDHSGLLISEKKIARQIGTTVTVDKLFSTLPVRGKEFSRNIRREYGK
LISLLNAYALIAKGVRLVCTNTTGKNIKAMVLKTQGSNSLKDNIITVFGMNTFKCLEPLS
ISISDGYKVEGYLSKPGHGSGRNLGDRQFFFVNGRPVDIPKVSKLMNELYKSSNSRQYPI
AVLNFIIPTKAYDVNVTPDKRKIFFSDECSLINSLREALERIYSPNCCIYSVNRLEESKK
EACNTELFTQEEFHISSQRISPDDDEHKETAYHEEKPVEEETTQDVSPLKVVEKGIEDSC
MGEQLAHIKCKSPKKKDFSLRAHFGDKGDGSPGYHNKELRTPMPSAMVCHHSPCPSKAVG
KDTIGNVNSSSHLSFVKSSITNFVTVNKRKHENSCTVLSEVPVLRNEVARCQMRKTNSVM
HTASSESPSESLFNLHQIDDSDEGNENESSITCRASCVPNAMGDSLYSGEDVNNVGFGKD
LESQEKALQHANVDSNALPGMQIEHVSEEPQEPDPVLKSSKVTSDSPMPSSGLEIFSTLH
FSIEDLKTRRKKRLSRLQGXSFTNGKMTNKRCYTAATLELSQPENDDRKVKALAAATSEL
ERLFNKSDFGRMKVIGQFNLGFIIGKIDEDLFIVDQHAADEKFNFERLSQTTVLNQQPLL
QPIRLELSPEEEVVASMHMDIIRKNGFTLEEDIHAPPGCHFKLKAVPFSKNVTFGAEDVK
ELISTLADSEGECSMVSSYRLDTPDSVCPSRVRAMLASRACRSSVMIGDPLGKNEMQKIL
EHLADLKSPWNCPHGRPTMRHLIDLATIYKRLDLNGTDLPWAYL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgtagcttcggttgattctccaactattaagcctataaataagtctgtagtt
cacaggatttgctcaggacaagtgattttagatctttcgtctgcagtgaaggagttagtt
gagaacagcttggatgcaggtgcgagcagcatcgaaattgctttgaaagaatatggtgaa
gaatccttcaaggttattgataatgggtgtggcatttcacctaataatttcaaggttctt
gcactcaagcaccatacttcgaaaatagcagattttcctgatctccaatctttggcaact
tttggcttcagaggggaggcacttagttctctttgtgcgcttgggaaattgacagtcgaa
acaagaactaaaagtgaaccagccgccacacacttgacttttgaccattcaggcttactg
atatctgaaaagaaaatagcgcgtcaaattggtaccactgtcactgttgataagttgttc
tctaccttaccagtgcgaggcaaggagtttagtcgcaacatccgaagagaatatgggaaa
cttatttctttactgaacgcatatgctcttattgcgaaaggagttcgattagtttgcacc
aacacaactggaaagaacataaaggctatggtgcttaaaacgcaaggaagcaattctctt
aaagacaacatcataacagtatttggcatgaataccttcaaatgtctagagcctttgagt
atatctatatcagatggctacaaagttgagggctacctttctaagcctggccatggcagt
ggacgtaatttaggggatagacagttcttttttgtcaatggccggccagtagatatccct
aaagtcagcaagcttatgaatgaattatataagagttcgaactctcggcaataccccatt
gcagtgttgaattttatcataccaactaaagcatatgatgtcaatgtaactcctgataaa
aggaaaattttcttttctgatgaatgttcacttataaattctttaagggaagctctagaa
aggatctattccccaaattgctgtatttactctgttaacagattagaggagtctaagaag
gaagcatgcaacactgagttatttactcaagaggagtttcatatatcatctcaacgaata
tccccagatgatgatgaacataaggaaacagcataccacgaggaaaagcctgtggaagaa
gaaaccacacaggatgtcagcccactaaaagtggtagaaaagggcattgaagattcatgt
atgggagaacaattggctcatattaagtgcaaaagtcccaaaaaaaaggacttttctctt
agagctcattttggagataaaggtgatggttctcctgggtatcacaataaagagctgaga
actcccatgcctagtgccatggtttgtcatcattctccttgtccttcaaaggcagtggga
aaagataccattggaaatgtaaattcgtcaagtcatttgagttttgttaagtcttcaata
accaattttgtaactgtaaataagaggaagcatgaaaatagctgtacggtactgtctgaa
gtgcctgttctaagaaatgaagtagctcgctgtcaaatgaggaaaaccaactctgttatg
catactgcatcatcagagtcaccatcagagtcactttttaatcttcatcagattgacgat
tctgatgaaggtaatgagaatgaatcttctataacttgtagagcatcttgtgtgccaaat
gcaatgggagactcgctttattctggagaagatgttaacaatgttggatttggaaaggat
ttagaaagtcaagagaaggcattacaacatgctaatgttgattcaaatgctttgccgggt
atgcaaattgaacatgtatcagaagagcctcaagagccagatccagtattaaaatcctcg
aaggtgacttcagattcaccaatgccttcttctggtttagagatattttccaccttgcat
tttagtatcgaagatctaaaaacaaggaggaaaaagaggctctcaaggttgcaaggtagm
agttttacaaatggaaaaatgacaaataaaaggtgctatactgctgcgacactggagctt
tctcagccagaaaatgatgatagaaaagtgaaggccctagctgcagcaacctccgagttg
gaaaggctcttcaataaaagtgattttggcagaatgaaggttattgggcaattcaatctc
ggttttatcattggaaaaatagatgaagacctcttcattgtagatcagcatgctgcagat
gagaaattcaattttgagaggctgtctcaaacaactgtcttgaaccaacaacctttgctt
cagccaattaggttggagctatctcctgaagaggaagtagttgcctcaatgcatatggat
ataatcaggaaaaatgggtttactttggaagaggatattcatgctcctcctggttgccat
tttaaactaaaagctgtccccttcagtaaaaacgttacttttggtgctgaagatgttaag
gagctcatctctacccttgccgatagtgaaggggagtgctcaatggttagtagttacaga
ctggataccccagattctgtttgcccatcaagagtccgtgcaatgttggcatcacgtgct
tgccgatcatctgtcatgattggagatcctcttgggaaaaatgagatgcaaaagatactt
gagcatttggcggatctcaaatccccttggaattgcccacatggcaggccgaccatgcgc
cacttgatcgatttggccaccatctataagaggttagatttaaatggaacagatttacca
tgggcctatttgtga
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