Nelumbo nucifera (sacred lotus): 104606161
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Entry
104606161 CDS
T04131
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104606161
09123 Folding, sorting and degradation
03018 RNA degradation
104606161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104606161
03041 Spliceosome [BR:
nnu03041
]
104606161
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104606161
mRNA degradation factors
5'-3' decay
Lsm complex
104606161
Spliceosome [BR:
nnu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104606161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104606161
NCBI-ProteinID:
XP_010269536
UniProt:
A0A1U8APK3
A0A822YR77
LinkDB
All DBs
Position
Un
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGTGRSAKGIGRGQDDG
SSKGAGGRGRGGSGGRSGANRGGGRGRG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgctccctctttcactactgaagacagcacagggtcatcctatgctggtggagctgaag
aatggagaaacttacaacgggcatttggtgaattgcgacacttggatgaacattcatcta
cgtgaagttatctgtacttcgaaagatggagacaggttttggcgaatgccagaatgctat
atccgtgggaatacaattaagtatcttcgagttccagatgaggtaattgataaagttcag
gaagaaaccaagagccgtgcagataggaagcctcctggagtaggacgtgggaggggaaga
gggagagaggatggtactgggaggtcagcaaaaggcattgggcgtggccaagatgatgga
agcagtaaaggtgcaggtggacggggtagaggcggatctggtggcaggagtggtgcaaat
agaggtgggggacgtggtcgtggctaa
DBGET
integrated database retrieval system
