Nelumbo nucifera (sacred lotus): 104606243
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Entry
104606243 CDS
T04131
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104606243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104606243
03041 Spliceosome [BR:
nnu03041
]
104606243
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104606243
Spliceosome [BR:
nnu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104606243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
104606243
NCBI-ProteinID:
XP_010269644
UniProt:
A0A1U8B1A0
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Position
Un
AA seq
814 aa
AA seq
DB search
MELEMEDSISSPVRRTEKAAYEQLEEIRTSMEDIVAKMLFIKKEGRPKAELRELVTQMSL
HLVNLRQVNRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKXHFVKAIKVCKDFKSK
YPDIELVPEEEFFSSAPQDIKGSVLSKDSAHDLMLKRLNFELFQRKELCKLHEKLEQHKK
SLMETIANRKKFLSSLPSHLKSLKKASLPVQHQLGVLHTKKLKQHILAELLPPPLYVIYS
QLLAQKEAFGESIELEIIGSMKDAQAFAHQQAIKDNGVSTNTEMNKLEDDVPDEEEDGQR
RRKRPKKVTGKENLDQSGIYQSHPLKIILHIHDDEVSNPKPTKLVTLRFGYLLKLNVVCV
GIDGSQEGPQNNILCNLFPDDTGTELPHQSAKLFVGDAAGFDERRTLRPYKWAQHLAGID
FLPEVSPLLTGCETQSSEMGKSSAVISGLALYRQQNRVQTVVQRIRLRKKAQMALAEQLD
SLMKLKWPALICEHVPWASHTPLCNLQSWSSIGPSSNQVSSLSGNAMGQIPDPLDLDVDG
RSGVSREEIESAREDGELPSVAQVSTPINDANLLDSKPLPAKSSDLEHSRDLALISKSSV
APINKLKSQSFKKHDEDLDILLDTESDMEEVALTELENENATSIGCSKVIDKSWEDYGSM
EFCLVLSRKMDKSQRNVKLEAKVKISMEYPLRPPVFTVKLYTIMPGESHERNASEWYNEL
RAIEAEINLHVVKILPVDYENYILAHQVCCLAMLFDFYMDEASPFSEMRKSTSVVDVGLC
TPTTGRILARSFRGRDRRKMISWKDMECTPGYPC
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggagttggagatggaggattcgatatcgtcaccggtgcgcaggacagagaaggcggcg
tacgaacagttggaagagatccgaacttcaatggaggacatcgttgcgaaaatgctcttc
ataaagaaggaagggagacccaaagccgaactaagagagctcgtcactcagatgtctctc
cacctggtcaacctccgtcaggtaaatcgttctatattgctagaagaggatcgtgttaaa
gcagaaacagaacgtgctaaggcaccagtagatttcactacattgcagcttcacaatttg
atgtatgagaaaawtcattttgtgaaagccataaaggtgtgcaaagatttcaagtcaaag
tatccggatattgaacttgtgcctgaggaagagtttttcagttcagcccctcaagatatt
aaaggatctgtactatcaaaagacagtgcacatgacctgatgctaaagcggcttaatttt
gagcttttccagcgaaaagaactctgcaaacttcatgagaaactggagcaacacaagaaa
agccttatggagaccattgcaaaccgaaagaagttcctttcaagtctcccttcacacctg
aaatctctgaagaaagcatccttgcctgtccaacaccaactgggggttctgcatacaaag
aaattaaaacagcatattttagcagaattactgccacctccactctatgtgatttattca
caattgctggctcagaaggaggcatttggggagagtattgaattggaaattataggaagc
atgaaggatgctcaagcctttgcccaccagcaagcaattaaggacaatggtgtttctaca
aatacagaaatgaataagttggaggatgatgtgcctgacgaggaagaggatggccaaaga
aggagaaaacggccaaagaaggttactggaaaagagaaccttgaccaatcaggaatctat
caatctcatcctcttaaaatcatccttcatatacatgatgatgaggtttcaaatcccaag
cctacaaaactggttactctgaggtttggatacttattgaagttgaatgttgtatgtgtt
ggrattgatggctctcaagaaggacctcagaacaacatcttatgcaacttgtttcctgat
gatactggtactgagcttccccatcagtcagctaagctctttgttggtgatgctgctgga
tttgacgaaaggagaaccttacgtccatataagtgggcccaacatttggcaggaattgat
tttctacctgaggtgtctcctttgcttacgggctgtgaaactcaaagcagtgaaatgggc
aaaagttctgcggttatttctggccttgctctttatcgtcagcagaatcgggtacaaaca
gttgtgcaaagaatccgcttgcggaaaaaggctcagatggctcttgcggagcagcttgat
tccttaatgaagcttaaatggcctgcattgatttgtgaacatgttccatgggcctcgcat
acccctttgtgcaatttgcagagttggtcatctataggaccctcatctaatcaggtttca
tctttgtctggcaatgccatgggacaaattcctgaccctttagaccttgatgtggatggg
agatctggtgtgtcaagggaagagatagagagtgctagggaagatggggaacttccatct
gttgctcaggtttcaactcccataaatgatgctaatctccttgattctaaacccctccca
gcaaaatcatctgatcttgaacattctagagacctggctttaatttcaaagagctcagtt
gctcctatcaacaagttaaaatctcaaagtttcaagaaacatgatgaggatttagatatt
ctactggatactgagagtgatatggaagaagttgcattaactgagctagagaatgaaaat
gccacaagtattggatgctctaaggtgattgacaagtcatgggaggactatgggtccatg
gagttttgcttggttctgagtaggaaaatggataagagtcagcgaaatgtgaagttggaa
gcaaaggtgaagatcagcatggaatatcctctcaggcctccggttttcactgtcaagttg
tataccatcatgccaggagaaagtcatgagaggaatgcttctgaatggtataatgaactc
cgtgccatagaagcagagatcaatcttcatgtcgtaaagattctgccagtggattacgag
aattacatcttagctcaccaagtatgctgtcttgcaatgctattcgacttctacatggat
gaggcgtccccattttctgaaatgagaaagagtacttctgtggtagatgttggtttgtgc
accccaactactggaagaatacttgcaagatctttcaggggaagagatcggaggaagatg
atctcttggaaggatatggagtgcacacccggatatccttgctag
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integrated database retrieval system