Nelumbo nucifera (sacred lotus): 104606335
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Entry
104606335 CDS
T04131
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104606335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104606335
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104606335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ARMET_C
Motif
Other DBs
NCBI-GeneID:
104606335
NCBI-ProteinID:
XP_010269779
UniProt:
A0A1U8B2E1
LinkDB
All DBs
Position
Un
AA seq
303 aa
AA seq
DB search
MGSSGASGDLSGEMEVDAFRRLFPLRFYERHLLESVRPDARPLGRARDTTVALGAVATAD
GSAMAKIGCTTMLAAIKLEVMTPPLDSSDEGSVAIDFHMPPICSPIVRPGRPAEVAPVVS
KQLSDAIISSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLAAVAAFSHLQIP
AVTVNDDGRVVIMSGENEEGKLLKDPVNKEKRKLTLTCIPFSLTCILHKNYILADPTAEE
ESVMETPVTVVLDSSSRLVSLYKPGGPVLAYMSAVQDCVALTRQRVKELQKILSDAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatcgggtgcctctggagatttatctggggagatggaggtggatgcttttagg
cgtctcttccctctgcgtttctatgaacgccatctccttgagtctgtacgtcctgatgcc
aggccacttggcagagcaagagataccactgtggcccttggggctgtggcaactgctgat
gggtcagccatggcgaagattggttgcacgaccatgttggctgcaatcaagttggaagtt
atgactcctccattggactcatcagacgagggctccgtagctattgatttccacatgcct
ccaatttgctctccaattgttaggcctggcagaccagcagaggtggcaccggttgtgtca
aaacagttatctgacgcaattataagttctggaatgatcaatttaaaggaactgtcatta
gtcagtggaaaggcagcttggatggcatatttggatatatactgtctagatgcagatggt
gctcttttcgatgcagcattacttgcagcagttgctgccttctctcacttgcaaattcca
gctgtcactgtcaatgatgatggaagagttgttatcatgtcaggggaaaatgaagaaggc
aagctactaaaagacccagtcaacaaagagaaaaggaagcttactctgacttgtattcct
ttctcattgacttgcatccttcacaaaaattacatcttggctgaccctactgcagaagaa
gagtctgtgatggaaactcctgttactgtggtattagactcttcaagtcgacttgtgtcc
ctctacaagccaggaggaccagttcttgcttacatgtcagctgttcaggattgtgttgca
cttacaaggcaaagagtgaaagaactccagaagattcttagtgatgccatttctgatatg
gaagttgactag
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