Nelumbo nucifera (sacred lotus): 104606508 Help Entry 104606508         CDS       T04131                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism nnu  Nelumbo nucifera (sacred lotus) Pathway nnu04120   Ubiquitin mediated proteolysis nnu04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:nnu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104606508  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     104606508  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:nnu04121]     104606508 Enzymes [BR:nnu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104606508 Ubiquitin system [BR:nnu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     104606508   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      104606508 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_TEP1_C zf-C3HC4_2 Beta-prop_HPS5 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st zf-C3HC4 WD40_like zf-C3HC4_3 Beta-prop_DCAF12 zf-RING_2 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP zf-C3HC4_4 zf-RING_UBOX U-box DUF1664 clamp_Gag1-like Beta-prop_NWD2_C Beta-prop_IFT122_2nd zf-RING_5 Motif Other DBs NCBI-GeneID:  104606508 NCBI-ProteinID:  XP_010270052 UniProt:  A0A1U8AQU4 LinkDB All DBs Position Un AA seq 687 aa AA seqDB search MGESTMGAIVPSVKAEARASAAVAGPSEAADEAVSAAATAGIGGAAAESLETGVAEFDKD FLCPICMQIIRDAFLTICGHSFCYMCIITHLHNKNDCPCCGNYLTNNQLYPNFLLNKLLK KTSARQIGKTTSPVEHLRRALQQGCEVSVKELDSLLTILLEKKRKTEQEEAETNMQILLD FLNCLRKQKLEELNEIQNDLQYIKEDVDAVERHRIELYRARERYSVKLRMLHDDPMVMKA WPSSMDKHSSGLISSGRSAQGGTSLGNFQNKRDLKAQASSQGFQRKDALSGSDTQNATTQ SGLATRKRRVHAQFNDLQECYLQKRRQWANQSHKQEERESNAIRREGYNAGLEDFQSVLT TFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNEPT DVHCPIVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVDTRQSVMEYEEHEKRAWS VDFSRTEPSMLVSGSDDCKVKIWCTKQEASVLNIDMKANICCVKYNPGSSIYVAVGSADH HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLLVRTFRG HTNEKNFVGLTVNSEYIACGSETNEVFVYHKAISKPAAWHRFGSSDLDDTDDDGGSYFIS AVCWKSDSATMLTANSQGTIKVLVLAA NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atgggcgagagtacaatgggggctattgtaccgtcagtgaaggcggaggcaagagcttca gcagcggtagcagggccgtcggaggccgctgacgaagcggtgtcggcggcagcgacagca ggaataggaggagcagctgcggagtcgctcgagacgggagtggctgagttcgataaggac ttcttgtgtccgatatgcatgcagatcatcagagacgcgttcttgacgatttgtggccac agcttctgttacatgtgtatcattactcatcttcacaacaagaacgattgtccttgttgc ggtaactacctcaccaataaccagctgtaccctaatttcctcctcaataagctactgaag aagacttctgctcgtcaaataggaaaaaccacatctccagtagagcatcttcgtcgagca ctacaacagggttgtgaagtgtcagttaaggagttagacagtctgctgactatccttcta gagaaaaaaagaaaaacggagcaagaagaagctgagacaaatatgcagattctgcttgat ttcttgaattgcctaaggaagcaaaaacttgaagagttgaatgagatacaaaatgatctt cagtacattaaggaggacgttgatgctgtagagagacatagaatagagttatatcgagca agggagagatattcagtgaagctgagaatgcttcatgatgatcccatggttatgaaagca tggccatcttcaatggataagcacagttctggtcttatctctagtggtcgaagtgcacaa ggaggaacaagtttaggcaattttcagaacaagagagacttaaaggctcaagccagctct cagggattccaaagaaaggatgctctcagtggatcagatacacaaaatgccactactcaa tcaggacttgctacaagaaaaaggcgggttcatgcacagttcaatgatctacaagaatgt tacttgcaaaagcggcgacagtgggccaaccaatcacataagcaagaagagagggagtca aatgccattaggagagaagggtataatgcaggtcttgaggattttcaatctgtattgact acttttacacgatacagtcgattgagggtcatagcagaactcaggcatggggatattttt cactctgccaatattgtatcaagcatagaatttgatcgtgatgatgaattatttgctact gctggagtttctaggcgcattaaagtctttgagttttcctcggtggtgaatgaacctaca gatgtgcattgtcctattgtggagatgtctacacgatccaaactcagttgcttgagttgg aacaagtatacaaagaatcatatagctagtagtgactatgaggggatagtcacagtttgg gatgtcgatactcggcagagtgtcatggaatatgaagagcatgaaaagagagcatggagt gttgacttttcacgcacagaaccctcaatgcttgtatctggtagtgatgattgcaaggtc aaaatctggtgcacaaagcaggaagccagcgttcttaacattgacatgaaagcaaatatt tgttgtgtcaaatacaatcctggatcgagcatttatgttgcggttggttctgcagatcat cacattcactattatgatttgagaaacattagccaaccactccatgtttttaatgggcac aagaaagctgtttcatatgtcaagttcttgtccaacaatgagcttgcttctgcatctact gacagcacattgcggttgtgggatgtaaaggaaaatctgctggttcgcacatttagaggt cacacaaatgagaagaactttgtaggtctcaccgtaaacagtgaatatattgcttgtggc agcgaaacaaatgaagtttttgtttatcacaaggcaatctccaaacctgcagcttggcat agattcggttcatctgacttagatgatactgatgatgatggaggatcctacttcattagt gctgtatgttggaagagtgattctgcaacaatgttaacagctaacagtcaaggaacgatc aaagtgcttgtattagcagcttaa

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