Nelumbo nucifera (sacred lotus): 104606696
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Entry
104606696 CDS
T04131
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03410
Base excision repair
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
nnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104606696
03410 Base excision repair
104606696
03420 Nucleotide excision repair
104606696
03430 Mismatch repair
104606696
03440 Homologous recombination
104606696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnu03032
]
104606696
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104606696
Enzymes [BR:
nnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104606696
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104606696
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104606696
MMR (mismatch excision repair)
DNA polymerase delta complex
104606696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
divDNApol
REV3_N
Motif
Other DBs
NCBI-GeneID:
104606696
NCBI-ProteinID:
XP_010270328
UniProt:
A0A822Z8Q0
A0A1U8B3P2
LinkDB
All DBs
Position
Un
AA seq
1084 aa
AA seq
DB search
MNNGNAGKKRGPASSGSEPTTKHQAMIEEEEMDEDVFFDETLLQEEEEALRNAEEREALA
SHLSKWKRPLLSAAYLSQSQSIIFQQLEIDYVIGDSHKVLMPNSSGPAAILRMFGVTREG
HSVCCLVHGFEPYFYISCPPGMGPDDISRFHQILESRMKEANRNSKVPKCVLRIEMVQKR
SIMYYQQQKSQPFLKIVVALPTMVTSCRGILDRGIQIDGLGLKSFMTYESNVLFALRFMI
DCNIVGGNWIEVPAGKYMNATRQLSYCQLEFDCLYSDIISHAPEGEFSKMAPFRILSFDI
ECAGRKGHFPEPSHDPVIQVANLVTLQGENQPFVRNVMTLKSCAPIVGVDVMPFDTEREV
LLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEALKIAEFPILGRIRNGRVRVKETTFS
SRQYGTRESKEVTIEGRVQFDLLQVMQRDYKLSSYSLNSVSSHFLQEQKEDVHHSIISDL
QNGNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLS
QLLRKAKQKSLVIPNVKRQGSDQGTYEGATVLEAKAGFYEKPIATLDFASLYPSIMMAYN
LCYCTLVMPEDARKLNLPPECVTKTPSGEIFVKSNLQKGILPEILEELLAARKRAKADLK
EAKDPFEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLV
EEKFTTLGGYKHNAEVIYGDTDSVMVQFGVPTVEEAMQLGREAADYISGTFIKPIKLEFE
KVYYPYLLISKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRD
IPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYAVKAAHVELAERMRKRDAATAP
DVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRIFDPILKN
ASKELFHGNHTRSVYISTPSNSGIMKFAKKQLSCLGCKALISNEDQTLCSHCKGREAELY
CKTVANVRELEILFGSLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD
RWKF
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcaacgccggcaagaagagaggtccggcttcgtccggatcagaacctacg
acgaagcaccaagcaatgatagaagaagaggagatggacgaggacgtgttctttgacgaa
actctccttcaagaagaagaagaagctctccgcaacgcagaagagcgggaagcacttgct
tcccatctctcaaagtggaagcgccctcttctttccgctgcttatctctcccagtctcag
agcatcattttccaacaacttgagatcgattatgtgatcggagatagtcataaagtgcta
atgccaaattcctctggtccggctgccattctcagaatgtttggtgtcacaagggaagga
cacagtgtctgctgccttgttcacggctttgagccatatttctacatcagctgtcctcca
ggaatgggcccagatgatatctctcgcttccatcaaattcttgagagtaggatgaaggaa
gcaaatagaaacagtaaggttcccaagtgtgttctacggattgagatggtgcagaagagg
agcataatgtattaccagcaacagaaatctcagccatttctcaaaattgttgttgcattg
cctacaatggtcactagttgccgaggaatccttgataggggcatacaaattgacggtctt
ggtttaaagagcttcatgacatatgaaagcaatgtcctttttgctcttcgtttcatgatt
gattgcaatattgttggaggcaattggatcgaagttcctgcaggaaaatatatgaacgca
acaaggcagttgtcttattgccagttggagtttgattgcctgtattctgatataatcagt
catgcccctgaaggagagttctcaaaaatggctccttttcgcattttgagttttgacatt
gagtgtgctggtcgcaaagggcattttcctgagcctagtcacgatcctgttattcaggtt
gccaatctagtgactcttcaaggagaaaaccagccatttgtacgcaatgtcatgacactt
aaatcatgtgctccaattgttggtgttgatgtaatgccatttgacactgaaagagaagtt
ttactagcttggagggattttatccgagaagtggatcctgatattataattggttataac
atctgcaaatttgatttgccatatctcattgagagagctgaggccctaaaaatagcagaa
tttccaatattaggccgcatcaggaatggcagggtgcgtgtaaaggaaaccaccttttct
tcaagacaatatggaacgagggaaagtaaagaagttacaattgaagggagagttcagttt
gatttacttcaggtcatgcaaagagattacaaactaagttcttattcattaaattctgta
tcatcacattttcttcaagagcagaaagaagatgtccatcattcaataatatctgatctt
cagaatggaaactcagagactaggaggcggcttgctgtctattgcctgaaggatgcttat
cttccacaacgacttttggacaaactgatgttcatttacaattatgtagagatggctcgg
gtcacaggtgttcccatctcttttttgctttcaagagggcaaagtattaaggttctttca
caacttcttagaaaggcaaaacagaaaagccttgtaattccaaatgtcaaacggcagggt
tctgaccaaggaacttatgagggtgcaactgttttggaggctaaggcagggttctatgag
aagcccattgcaacattggattttgcatctctgtatccatcaatcatgatggcatacaat
ctatgttactgcactctggtaatgcctgaagatgcccgcaaactcaatttacctccagaa
tgtgtcactaaaactccatctggtgaaatttttgtcaaatcaaatttacaaaagggcata
cttccagaaattcttgaggaacttttggctgctcgtaaaagagcaaaagcggatctaaag
gaagcaaaggatccctttgaaaaggctgtgcttgatggtcgccagctggctctgaaggta
agcgccaattctgtatatgggtttacaggagctactgttggccagttaccctgtcttgag
atatcatctagtgtgactagctacggccgacaaatgattgaacacacaaagaagcttgtt
gaggagaaattcacaacacttgggggctacaaacataatgctgaggttatttatggtgac
actgattcagttatggtacaatttggtgtgcctaccgtagaagaagcaatgcagttggga
agagaagctgctgactacataagtggcactttcattaagcccatcaaactagagtttgaa
aaggtttactatccatatctacttattagcaagaagagatatgctgggctattttggaca
aatcctgataaatttgacaagatggacactaaaggcattgaaacagttagaagggacaat
tgtctcctagtaaaaaacctggtgaatgaatgtctccacaaaatcttaattgaccgggat
attcctggtgcagtccagtatgtcaagaataccatttcagatcttctaatgaaccgcatg
gatttgtcgcttctagttataactaagggcctgacaaagacaggggatgattatgcagtg
aaggcagcacatgttgaacttgctgaacgaatgcgcaagcgagatgctgcaactgctcca
gatgttggtgatcgtgtaccatatgtcattattaaagctgctaaaggtgcaaaggcttat
gaaaggtcagaggatcccatatatgtgctagagaataacataccaatagatccccaatat
taccttgaaaaccaaattagcaagccacttttgaggatatttgatcccatactaaagaat
gcgagcaaggaactcttccatggtaatcatacaagatctgtctacatttcaactccttca
aacagtggtataatgaaatttgctaagaagcagctcagttgcttgggatgcaaagctcta
atcagtaatgaagatcaaactctctgttcacactgcaagggaagagaagctgagctatat
tgcaaaacggttgctaatgtgcgggaacttgagatactgtttgggagtctgtggacacaa
tgccaggagtgccaaggttctcttcaccaggatgtactctgtacaagtcgtgattgccca
atattttatcggcggaagaaggcacagaaggacatggctgaagccaagctgcagttagat
cgctggaaattttga
DBGET
integrated database retrieval system
