Nelumbo nucifera (sacred lotus): 104606717
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Entry
104606717 CDS
T04131
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104606717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104606717
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104606717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104606717
NCBI-ProteinID:
XP_010270361
UniProt:
A0A1U8AV18
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Position
Un
AA seq
368 aa
AA seq
DB search
MVGQGAKAEDLELCFQKLVVFGGGREKMGGGAVMTGWKDLPMELLLRIVSLVDDRTAIIA
SGVCTGWRDAICLGLTHLCLSWCKDNMNNLVLSVAPKFTKLQTLTLRQNKPQLEDSAVET
IANCCHDLKDLDLSKSFKLSDRSLYALAHGCPNLTKLNISGCSAFSDSALVYLTGFCRNL
KYLNLCGCVRAATDRALQAIAYNCSQLQCLNLGWCEGVTDAGVTSLAYGCPDLRALDLCG
CVLITDESVIALANRCHHLRSLGLYYCQNITDRAMYSLANSRVKGKHNLWKSVKSGYNDE
GLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACAIQAHRAV
NTLPHPAH
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcagggtgcaaaggctgaagatttggaattgtgctttcagaagcttgtggtg
tttggcggtggaagagagaagatgggaggaggagccgtgatgactggttggaaggacctt
ccaatggagcttttgttgcggattgtatcacttgttgacgaccggacagccatcatagct
tcaggagtgtgtactgggtggagagatgctatttgcttagggctcacccatctctgcctc
tcatggtgcaaggacaacatgaacaatcttgtgctttcagttgcccccaaattcacgaag
ttgcagaccctaacattgcgccaaaataaaccacaactcgaggatagtgctgttgagaca
attgcaaactgctgtcatgacctgaaggacttagacctcagcaaaagtttcaagcttagt
gaccgctcattatatgccttagcacatgggtgtcccaaccttaccaagctcaacatcagt
ggttgttcagccttcagtgattctgctcttgtatatctgacaggcttttgcaggaactta
aaatacctgaatctttgtggatgtgtaagagcagcaactgacagagccttgcaggctatt
gcgtataattgcagtcagttgcagtgtctgaatcttggatggtgcgagggtgtcactgat
gctggagttactagtctagcatatggatgtccagatctcagggctctggatctctgtggt
tgtgttcttataacagatgagagcgtgattgctttagcaaacaggtgccaccatctcaga
tcccttggcctgtactactgtcagaacattacagatagagctatgtattccctggccaac
agccgagtaaagggcaagcataatctgtggaagtctgtgaaaagtgggtacaatgatgaa
gggctcatgaatctaaatatcagccagtgtacagctctcaccccaccagctgttcaggca
gtgtgtgactcattccctgcacttcacacctgcccagggaggcattccctcatcataagc
ggctgtctcagcctaacatccgttcactgtgcatgtgccatccaagcacaccgtgcggtg
aacaccctgcctcatccggcacactga
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