Nelumbo nucifera (sacred lotus): 104606737
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Entry
104606737 CDS
T04131
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104606737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104606737
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
RNases
104606737
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF1907
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
104606737
NCBI-ProteinID:
XP_010270385
UniProt:
A0A1U8AV44
LinkDB
All DBs
Position
Un
AA seq
613 aa
AA seq
DB search
MGFPLTVPLYASYAPFACNFSFNDSFLSSRRMPKMTSSCQKRETQTRKEDSDSKNNNDKT
NNTAYFDVYGPEGKADVIFKTPEAHSTLNLQDVQGLVTWVFGEGFMPSWVFIKNKPLIPK
VVLLYIPGLDAATYMAYSSLFTGLRESCGNPRAVLALSCVSDGMQTIDALLTCKLKRKRG
EINPVSQICDQTREQGICNSSSHNPSSLGSMKDLPFPVSYYTLTAKELEDNGYCCKEPGD
LGFVSTLPAPIGSSPYEMLGLDCEMCVTANGFELTRVTLVDIEGQVVLDKLVKPSNDIID
YNTRYSGITAEMLDGVTTTLKDIQEELLKLVYKETILVGHSLENDLLALKISHDMVIDTA
VLYKHPRGGHFKTALRVLARRFLSREIQGSGNGHDSVEDARAAMELALLKIRHGPEYGSP
PTFMRKKLVTVLSENGKTCSFIDDVSIVKRYAAGSCHSFPICSDDEALLKAKKEVKNDKV
HFIWTQFSELNSYLKGQAEDTEKLNAKIAEMMSLLTCHNTSTKRKGIKCSLTSELKDILT
CMDSRIQSLYDMLPINTMFIVCTGHGDTSIVQRLRKMLVEQSESITCREKFVKVLEELQA
QAEVALCFASIKH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcctctcactgttcccttgtatgcttcttacgcccctttcgcttgcaatttt
tctttcaacgatagttttctctcttctcggcggatgcccaagatgacttcttcgtgccag
aaacgcgaaacccaaacaagaaaagaagatagtgatagcaagaacaacaatgacaagacc
aataatactgcatactttgatgtctatgggccggaaggaaaggcagatgttattttcaaa
accccagaagctcactcaactttaaatctacaggatgttcaaggacttgtcacatgggtt
tttggtgaaggatttatgccatcttgggtctttatcaaaaacaagcctcttataccaaaa
gtggttctgctttatatcccgggccttgatgcagctacgtacatggcctattccagttta
tttactggtcttagagaaagttgtggcaatccaagggcagttttagcccttagctgtgta
tcagatggaatgcagacaatagatgcactactaacatgcaaactgaaaagaaagcgtgga
gagatcaatccagtttcccagatctgtgatcaaacacgtgaacaaggtatttgtaattct
agttcacataatccttcctctttgggaagtatgaaggatctaccatttccagtttcatat
tacacacttacagcaaaagagctagaagataatggatattgttgcaaggaaccaggtgat
ttaggttttgtctcaactcttcctgctcctataggatcttccccatatgagatgctggga
cttgactgtgagatgtgtgtcactgcgaatgggtttgaacttacaagagtgacattggta
gatattgaaggacaggttgtgttagacaaattggttaaaccttccaatgatataatagac
tacaacactagatacagtggaatcactgctgagatgctggatggagtgactacaactctt
aaagatattcaggaagagttactaaagcttgtttacaaagaaacaatccttgttgggcac
tctttggagaatgatctgttggcactgaaaatttctcatgatatggtgattgatactgcg
gtgttatacaagcaccctcgtggtggacatttcaagactgctttgcgagttcttgccagg
aggttcctctccagggaaatacagggttcaggaaatgggcatgacagtgttgaagatgca
agagctgcaatggaattagcacttttaaagattagacatgggcctgaatatggttcacct
ccaacattcatgcggaagaaactggttaccgttttgagtgagaatggcaaaacttgttct
tttattgatgatgtttccatagtgaaaagatatgctgctggttcatgccattcatttcct
atatgttcagatgatgaagctcttttgaaggctaaaaaggaggtcaagaatgataaggta
cacttcatctggactcaattttcagagttgaattcctatttaaagggacaagcagaggac
acagagaaattgaatgcaaaaattgcagagatgatgtcattgcttacatgtcataacacc
tctacaaagaggaaaggcatcaagtgcagtctgacctctgaactgaaggacatactaact
tgcatggattctcgaattcaaagcctctatgatatgctacctattaatactatgtttatt
gtatgtactggtcatggagacacatcaattgtccaaaggttgaggaaaatgcttgtggaa
cagagtgagtccataacatgccgcgaaaaatttgtaaaggtattagaagagctccaagcc
caggctgaagtagctctgtgttttgcaagtatcaagcattga
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