Nelumbo nucifera (sacred lotus): 104606952
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Entry
104606952 CDS
T04131
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104606952
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
104606952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_DCAF4
WD40_Gbeta
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_LRRK2
WDR54
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104606952
NCBI-ProteinID:
XP_010270704
UniProt:
A0A1U8ASD2
LinkDB
All DBs
Position
Un
AA seq
445 aa
AA seq
DB search
MEVVIASSPVDAGIGCWDLHSGAEQLRYRSCTSTPHGLACVGQRFLVSSQLRDSSSSSGT
ILYWSWNKPQVEVKSFPAEPIHPLISNSDGTYIIGGGSSGAIYFWEVASGRLLKRWHAHY
RAATCLFLSDDESLLVSGAEDGCIRVWSLFMVFDDIGMEMAKHPYEYSFSEHTLRVTDVV
SGYGGCNAIIVSASEDRTCKVWSLSRGKLLRSIDFPSIIDAVALDPGEHVFYAGARDGKI
YIAALNAESTPSNIYGKHIIGSLSDNSKGVTCLAFSMDGILLVSGSEDGTIRVWDAKTRN
IVRIFRLAKGPINNVLVVRRPLYSNFQTSANSHASLSRRHVPLLPPPLSKYVNSTDEIVD
SGAITVPQTPSSDIMDAPYLSSHVLTKQISELQQQSSAATGMEVDRLKLDCKRSLEMVQK
WKEMFADLHKFCVDELLGNDQTQTQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgatagcgtcgtctcccgttgatgctgggattggttgctgggacttgcat
tcgggcgcagaacaactgcgttaccgatcatgcacttctactcctcacggcttagcttgc
gttggccaacgctttcttgtctcttcccagcttcgagactcctcttcgtcatcgggcacc
attctttactggtcctggaacaagcctcaagttgaagttaaaagttttcctgctgagcca
atccacccacttatttccaatagtgatgggacatatatcattggaggaggttcatccggg
gccatttacttttgggaggttgcaagtggcagactacttaagaggtggcatgctcattac
agggctgctacttgcttatttttgtccgatgatgaatcccttttggtttctggggcagag
gatgggtgtattagagtgtggtcccttttcatggtttttgatgatatcggaatggaaatg
gcaaaacatccatatgaatatagtttctctgagcacactctgcgtgtgactgatgtggtt
tctggttatggaggatgcaatgcaattattgtatctgcttctgaggatcgaacgtgtaag
gtttggagcctatctagggggaaattattgagatcgattgatttcccttctataattgat
gcagttgcactagaccctggtgaacatgtattctacgctggtgctagggatgggaagata
tatattgctgctcttaatgctgaaagcactcccagcaacatttatggaaaacatatcatt
ggctcattatctgataacagtaagggtgttacttgcttagcgttcagcatggatggaatc
ctattagtttctggatcagaggatggcacaattcgagtttgggatgctaaaacccgtaac
attgttcgaatttttagacttgccaaaggtcccatcaacaatgttcttgttgttagacga
cccctctactctaattttcagacatcagcaaattcacatgcttccttatctagaaggcat
gttccactgttgccaccaccactgagtaaatatgtaaactcgacagatgaaattgttgat
tcaggggctattactgtacctcagacacccagcagtgacataatggatgctccatatctc
agttctcatgtgctgacgaagcaaatcagtgaacttcagcaacagagttctgctgccact
ggaatggaggtggatagattgaagcttgactgcaaaagatcattggaaatggtacaaaaa
tggaaggaaatgtttgcagaccttcataaattttgtgtagatgagcttttgggcaatgat
caaacacaaacacaatga
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