Nelumbo nucifera (sacred lotus): 104607232
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Entry
104607232 CDS
T04131
Name
(RefSeq) PHD finger protein PERSISTENT TAPETAL CELL 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nnu03000
]
104607232
Transcription factors [BR:
nnu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104607232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
PHD_5
ASH2L-like_WH
PHD_2
Motif
Other DBs
NCBI-GeneID:
104607232
NCBI-ProteinID:
XP_010271105
UniProt:
A0A1U8B4R0
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All DBs
Position
Un
AA seq
654 aa
AA seq
DB search
MTQLNLTGCKKRKRGERVFKLRTFCEPGYPVEFNGLFRQNIRALIELGTPETNLCSGMHS
WSFQLELHQCPSVHIVLLVIEESIERSAYRNCNHCKYMGWGHHMICSKKFHFVVSSRETM
PVIAAGISYEGSCRGSDQKAAKSNFVGLQGYLMHGVLHSNGFGHLLCVNGVEKGAELAGH
EIMDLWDRICTALRARKVSINDVARKRGMDLRLLHGVAYGEPWFGRWGYRFSRGSYGVTE
PMYRKAIEVIQSIPLCLLVHHFGCLNHEIPAIFTRYQALSGHSLVTLGHLFHFMIELKVH
LPQENHMASDNSGILFDTACRWSPKRIEMATRVIVEFLRKAEFKWVSRQEVRDAARAYIG
DTGLLDFVLKSLGNHIVGNYMVRRSLNPVTKVLEYCLEDISSTYLNQEGLSLNDPKGKAC
HKITRAQLMNDIAYLYRSILNEQRSVLTSGIFTSIPLATRIILDSKGLIKNYGGEVAPSD
NVGVEGNLTFLCTALLKNKLDGEEEKIRTLPPYELIILPLDATIEELKKETERVFRETYW
GLRSFIIESISGVNAKESDMIFRLVELCCCLVMEGRMVEEGIGIDDIYESGRDDCIVDCP
CGAKEDDGERMISCDICEVWQHTRCVRIPNGEDIPHIFLCSRCEHDIVLLPSLP
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttgaaccttactgggtgtaagaaaaggaagagaggggagagagtttttaag
ttgaggaccttctgcgaacctggttacccagttgagttcaatggcctatttcgccaaaac
atcagagccttaattgaattggggacccctgagacaaatttgtgcagtggaatgcatagc
tggtccttccagcttgaactccatcaatgcccttccgtccatatcgtgcttcttgtcatt
gaagaatcgatcgaaaggtctgcatatcgtaattgcaatcactgcaaatacatgggctgg
gggcaccacatgatctgcagcaagaagtttcactttgtagtgtcctcaagggaaaccatg
ccagtgattgcagcaggtataagctatgaaggcagttgtagagggtcggatcagaaggcg
gcgaagtcgaactttgtagggttacaaggctaccttatgcatggggtcttgcactctaat
gggtttgggcatttgctctgtgtaaatggagtggagaagggagcagagttggcagggcat
gagatcatggacctttgggaccgaatatgcacggcactgcgggcaaggaaggtgagcata
aatgatgttgcaaggaagagaggcatggatttgaggttattacatggggtggcatatggt
gaaccttggtttggacgatggggctacaggttcagccgtggaagctatggtgttactgaa
ccaatgtaccggaaagccatagaagttatccaaagcatacctctgtgcttacttgttcat
cactttggttgcttgaatcatgaaattccagccatatttactcggtaccaagcactttca
ggtcattccttggtcacactaggccatctgttccatttcatgatagaattgaaggtccac
cttccacaagagaatcacatggcttctgataactctggaattctgtttgacacagcatgt
cgatggtctccaaagcgaattgaaatggcgacacgagttattgttgagtttttaaggaag
gcagagttcaaatgggtctcaaggcaagaagttagagatgctgctcgtgcctacattggt
gacacaggtttacttgattttgtactgaaatcactaggaaaccatattgtggggaattat
atggttcggcgaagtttaaacccagtaaccaaagtcctagaatattgcttggaggacatc
tctagtacatatctcaatcaagaaggtttgtcactgaatgatcccaaaggaaaggcttgt
cataagattacaagagctcaactcatgaatgatattgcctacttgtacagatccattctc
aatgagcagagatcagtgctcacttcaggtatctttacctccatcccattagctacaagg
ataattcttgactccaagggtcttatcaaaaattatggaggagaggtagctcctagtgac
aatgtgggtgttgaaggaaatctgacgttcctatgcacagctctgttgaaaaacaagctt
gatggtgaggaagagaaaattaggactttaccaccatatgaattaataattttgcctctt
gatgctaccattgaagagcttaagaaggaaactgaaagggtctttcgtgagacatactgg
ggtttaaggagcttcatcattgagtcgatctctggtgtgaatgccaaggaatcagatatg
attttcagactagttgaattgtgttgttgccttgttatggagggaaggatggtagaggag
gggattggcattgatgatatatatgaaagtggaagagatgactgcattgtagattgtcct
tgtggagccaaggaagacgatggtgagcggatgatctcatgtgatatttgcgaagtttgg
cagcacactcgatgtgttcggatcccaaatggcgaagatattccccatatatttctctgc
agccgctgtgagcatgacattgtcctccttccttccctaccataa
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