Nelumbo nucifera (sacred lotus): 104607288 Help Entry 104607288         CDS       T04131                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism nnu  Nelumbo nucifera (sacred lotus) Pathway nnu03013   Nucleocytoplasmic transport nnu03040   Spliceosome Brite KEGG Orthology (KO) [BR:nnu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104607288   09122 Translation    03013 Nucleocytoplasmic transport     104607288  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nnu03019]     104607288    03041 Spliceosome [BR:nnu03041]     104607288 Messenger RNA biogenesis [BR:nnu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      104607288 Spliceosome [BR:nnu03041]  Complex C   Other components    EJC/TREX     104607288  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     104607288 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N Motif Other DBs NCBI-GeneID:  104607288 NCBI-ProteinID:  XP_010271208 UniProt:  A0A1U8AX13 LinkDB All DBs Position Un AA seq 1900 aa AA seqDB search MSLPPIECKYVTEECLREWKNGNTNFKVPNPVPALRFLYELCWAMVRGELPFPKCKAALD SVEFSEKISSEEMGSNLADIVTQMAQDLTLPGEHRARLIKMAKWLLESTLVPLRLFQERC EEEFLWESEMIKIKAQDLKAKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRSGPEA STNNASTAMISIIKSLIGHFDLDPNRVFDIVLECFELQPDNGVFLDLIPLFPKSHASQIL GFKFQYYQRMEVNNPVPFGLYRLTAVLVKAEFIDLDSIYAHLLPKDDEAFEHYNAFSAKR FEEANKIGKINLAATGKDLMEDEKQGDVTIDLFAALDMESEAVAERSTELENNQSLGLLS GFLSVDDWYHAQILLDRLSPLNPVAHVQICEGLFRLIEKSISSAYDIVRHTHIHSGLSTG SVSDNMEITDASSVKRSFVDLPRELFQMLVSAGPYLYRNTVLLQKVCRVLKGYYLSAQEL VGSGGETTYPESGNGGSRGPGFHLREAQARVEEALGKCILPSLQLIPANPAVGQEIWEVL SLLPYEVRYRLYGEWEKEDERIPMILAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAH ANPMTVLRTIVLQIEAYRDMITPVVDAFKYLTQLEYDVLEYVVIERLAQGGREKLKEDGL NLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLAKGKGIELVLLQELIQQMANVQYT ENMTEEQLDAMAGSETLRYHATSFGTTKNNKALIKSTNRLRDSLLPKEEPKLAIPLLLLI AQHRSVVIMKSDSPYIKMISEQFDRCHGTLLQYVEFLCSALSPATAYAQLIPTLDDLVHK YHLEPEVAFLIYRPVMRLFKCTGGSSIFWPSDNTEEANILNTEKDSEPSVSSTNEVLDLG SHLKPIMWSDLLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYLSEIAKQHAA LKALEELTDNSNSAIAKRKKDKERIQESLDRLTGELQKHEENVASVRRRLAREKDKWLSS CPDTLKINMEFLQRCIFPRCIFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQ PMICCCTEYEAGRLGRFLYETLKMAYHWKSDESIYERECGNMPGFAVYYRYPNSQRVTYS QFIKVHWKWSVRITRLLIQCLESAEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKI KGDEREDLKVLATGVAAALASRKSSWVSEEEFGMGYVDLKPAPSPATKSSAGNLVGGSNG PALNISQTESVGQRNMSTATQLLDSGNAVKDLTPRTKPADGRVERAEGTTVNKPDPGQAK GKSGSLANGLDAQMTVPSGAVQAGPSRQTETQKRADEPAKGSLDENMPKVAPKTATESEM RPTVKRSIPTGSLSKQQKQEVTKDDNKSGKAVGRIPGPSSERDISAHPLEGRQGGAANAA SAVASNGNTVPINTKGSTTSARTSMDVYGSITKMDSIAAKPSDARIPAGKDVDDSEISEV ARPFSSRPVHSPLRDDSFNSSKSADKQQKRTSPNEEQDRQNKRRKGDNEVKDLEGDVRFS ERDRSIDARIAEKPHSLDLDKIGIDEHIQSRATEKLLDRKEKASERYDRDHRDRLERPDK SRGEDILAEKSRDRSMERYGRERSVERMQERGTDRSSDRVVDKSKDDRNKDDRSKPRYSD PLAEKSHLDDRFHGQNLPPPPPLPPNMVPQSVNASRRDEDVDRRVSNTRHIQRLSPRHEK ERRRSEENSIVSQDEAKRRRDDDFRERKRDERDGLSMKVDERERDKANLLKEDTDANAAS KRRKLKREHLPSGESSEYSLPVPPPPPIAIGMSQSYDGRERGDRKGAMVQRAGYLEEPVP RMHGKEATGKITRRDSDQFPDRDWEDEKRQRAEAKRRHRK NT seq 5703 nt NT seq  +upstreamnt  +downstreamnt atgtcccttcctcccatagagtgtaaatacgttacagaggagtgtctccgggaatggaag aatgggaacaccaatttcaaggtaccgaacccggtcccggcgcttcggtttctctacgag ctctgctgggctatggttcgtggagaattaccgtttccgaagtgtaaagcagcattggat tcagttgaattttctgagaaaatttcgagtgaagaaatgggttcaaatttagcagatata gtgacccaaatggctcaagatcttactctgcctggagagcatcgtgctcgccttatcaaa atggcaaaatggctactggagtctacactggtcccattgaggcttttccaggaacgatgc gaggaagaatttctatgggagtctgaaatgatcaagataaaggcccaggatttaaaggca aaagaggtcagggtaaacacccgccttctttatcagcaaacgaaattcaaccttcttagg gaagaaagtgagggttatgctaagctggttacacttctctgccgaagtggtcctgaagct tcaactaacaatgcatcaacagcaatgatcagcatcattaagtcactaattggacacttt gatctggatccgaatcgtgtttttgatattgttttggaatgttttgaacttcagcctgac aatggtgtctttttagacttgatacctcttttcccaaagtctcatgcttctcaaatcttg ggttttaagttccaatattatcagcgcatggaagtaaataatcctgtgccttttggactc tatcgacttacagctgtgcttgtgaaagcagagttcattgatcttgatagcatatatgca catttgcttcctaaggatgatgaagcttttgagcattataatgcattttctgccaagcgg tttgaagaggctaacaaaattggcaaaataaatcttgctgctactggaaaggatctgatg gaagatgaaaaacaaggggatgtgacaatagatctttttgctgctttagacatggaaagt gaagccgttgctgaacgttcaactgagctggaaaataaccagagtctgggtttgctcagt gggtttctttctgttgatgactggtatcatgctcagatattgttggatcgtctctctccg cttaatcctgttgcacatgtgcaaatatgtgagggtttatttaggctcattgaaaaatca atctcttcagcatatgatattgttcgccatacacatattcatagtggactgtccactgga tctgtttctgataatatggagataacagatgcatcatcagtcaagagatcttttgttgat cttccaagagaactttttcaaatgcttgtttctgctggtccttatctctaccgtaatact gtactgttacagaaggtatgcagggtcttaaaaggctattatctgtctgcacaagagctt gtgggttctggtggtgagactacttaccctgagtctgggaatgggggaagccgaggtcct ggttttcacctgagggaagctcaggcaagggttgaggaagcactaggaaaatgcattctt ccttctttgcagttgatacctgcaaatccagctgttggacaggagatatgggaagtatta agtctcctcccatatgaggtgcggtatcgtttgtatggagaatgggaaaaggaagatgag cggattccaatgattttggctgcaagacagacagcaaagttggacaccagaagaatccta aaacgacttgcgaaggaaaatttaaagcagcttggtaggatggtggcaaaactagctcat gccaacccaatgacagtgcttcgaacaattgtactgcagattgaggcataccgggatatg atcactccagttgtagatgcattcaagtatttgacacagcttgagtatgatgtcttggag tatgttgtgattgagcggttggcacaagggggccgtgaaaagctaaaggaagatggcctt aatttgtctgactggcttcaatctttggcttccttttggggccacttgtgtaagaagtac ccttcaatggagttaaggggtcttttccaatatcttgtgaatcagttggcaaaggggaag ggaattgagcttgttcttttgcaggagctcattcaacaaatggccaatgtccaatacaca gaaaacatgacagaggaacaattggatgcaatggcagggagtgagacactgcggtatcat gctacttcttttggaacaacaaaaaacaacaaggctttgataaaatccacaaataggctg agggactcattacttccaaaggaggaacctaagttggcaatccctcttttgttgctcata gcccaacatcgttctgtggtcatcatgaaatcagattcaccgtatattaagatgattagt gagcagtttgatcgttgccatggaacccttcttcagtatgtggaattcctttgtagtgca ctatcaccagctacagcctatgctcagctaatccccactcttgatgatcttgtccacaaa taccatcttgaacctgaggtggcttttttgatatatcggcctgtgatgaggctcttcaag tgcacaggtggttctagtatcttctggccttccgacaatactgaagaggcaaatatatta aatactgaaaaagattctgaaccttcagtctcgtctaccaatgaagttctggatcttggc tctcatctgaagcctataatgtggtcagatcttttagatacagttcgaacaatgttacct tcaaaagcttggaatagcctatctcctgatctctatgctacattttgggggcttactctt tatgatctttatgttccaaaaaaccgttatctttctgaaattgccaagcagcatgctgcg ctgaaagcccttgaagagcttactgataattcaaattctgcaatagccaaacggaagaag gacaaggaaaggatccaagaatcactagatcgtttgacaggtgagctacaaaaacatgaa gaaaatgttgcatctgtccgccgacggcttgctcgagagaaggataagtggcttagttcc tgcccagatactttaaagatcaacatggaatttcttcagcgctgtatttttccacgctgt atatttagcatgccagatgcagtttactgtgccatgtttgtgcacacgctacattctctt gggacaccattctttaacactgttaatcatattgatgttctcatatgcaagaccttgcaa ccaatgatctgttgttgcactgaatatgaagcaggtagacttgggaggtttttgtatgag acattaaaaatggcctaccattggaagagtgatgaatctatatatgaacgtgagtgtgga aacatgccgggctttgctgtgtattacagatatccaaacagtcagcgtgtcacatatagc cagtttattaaggtacattggaaatggagtgtgagaattacacggttgctcattcaatgt ctggaatcggccgagtatatggagattcgaaatgcacttattatgttgacaaaaatttca agtgtcttcccagtaactagaaagagtgggattaatcttgaaaaacgggtagctaaaatt aagggggatgagagagaagatctcaaggtattggcgacaggtgttgctgcagctctggct tctaggaagagctcatgggtttctgaagaagaatttggcatgggctatgttgacctaaag cccgcaccatcacctgctacaaagtcttcagctggtaatttagtaggtggatctaatggt cctgcccttaatatttctcaaactgagtctgttggtcaaaggaatatgagtacagcaaca caacttctagactctggaaatgctgtcaaggatctcacaccacgaacaaaacctgcagat gggagggtggaacgggcagaaggcactacagttaataaacctgatccagggcaagcaaaa ggaaaaagtggctcattagcaaatgggttggatgctcagatgactgtgccttctggtgct gtacaagctggaccatccaggcaaactgaaactcaaaaacgtgcagacgaacctgcaaag ggctcattggatgaaaacatgcccaaagttgcaccaaagactgctactgaatcagagatg aggcccacagtaaaacgttcaattcctactggatctctttccaagcaacaaaaacaggag gttacaaaagatgataacaaatctggaaaagcagttggaagaatccctggtccttctagt gagagagatatttctgctcatccattagaaggtaggcaaggtggggcagccaatgctgct tctgcagttgcatcaaatggtaacacagttccaattaacactaaaggttcaaccacatct gccagaacttccatggatgtgtatggtagtataacgaagatggacagtatagctgctaag ccatctgatgcaaggattcctgctggaaaggatgtggatgactctgaaatttctgaagtg gcaaggcccttctcatcccggcctgttcattctcctctccgtgatgattctttcaattct tcaaaatctgcagacaagcagcagaagagaactagtccaaatgaggaacaggacagacag aacaaacggaggaagggagacaatgaagtgaaagatttagaaggtgatgtcagattctct gaaagagataggtccattgatgccaggatagcggagaaacctcattctctggatcttgac aaaataggaattgatgagcatattcaaagcagggctacagagaagcttctggatcggaaa gagaaggccagtgaaagatatgacagagaccacagggatagactggagcgtcctgataaa tctcgtggtgaggatatcctggctgagaagtcaagagacaggtcaatggaaagatatgga agagagcgttcagttgaaagaatgcaagagaggggaacagataggagctctgatagggta gttgacaaatctaaggatgacagaaataaagatgataggagtaaaccacgctacagtgat ccattggctgaaaaatctcatcttgatgatcgttttcatgggcaaaacttgcctccccca cctcctcttcctcccaacatggtgccacaatcagttaatgctagtcgaagagatgaagat gttgatagaagggtcagtaataccaggcatattcagaggctttctcccagacatgaaaaa gaacggagacgctctgaggagaattcaatagtttcacaggacgaagcaaagcgtaggaga gatgatgattttagggagagaaaaagggatgagcgagatggtttgtcaatgaaggtggat gagagggagagggacaaagcaaaccttttgaaggaggacaccgatgcaaatgcagcatct aagaggaggaaacttaaaagagagcacttaccatcaggggaatctagtgaatattcactg ccagtccctcctccacctcctattgctattggtatgtcgcaatcatatgatggacgagaa agaggggatagaaaaggtgccatggttcaaagggcaggctacctggaggaaccagtgcca aggatgcatggcaaagaagctactggcaagattacccgacgggacagtgatcagtttcca gatagagattgggaagatgagaagagacagagagctgaggcaaaaaggaggcatcgaaaa tag

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