Nelumbo nucifera (sacred lotus): 104607867
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Entry
104607867 CDS
T04131
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03420
Nucleotide excision repair
nnu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104607867
09124 Replication and repair
03420 Nucleotide excision repair
104607867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104607867
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104607867
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104607867
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104607867
TCR (transcription coupled repair) factors
Cul4-CSA complex
104607867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
104607867
NCBI-ProteinID:
XP_010271927
UniProt:
A0A822ZEK5
A0A1U8B6R5
LinkDB
All DBs
Position
Un
AA seq
1089 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEALDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGACLLIPVPMPLGGVIIIGEETIVYC
SATAFKAIPTRPSTTRAYGRVDADGSRYLLSDHAGLLHLLVITHEKERVTGLKIELLGET
SIASTISYLDNAFVYVGSCYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRLSTDDPYDTFLVVS
FISETRILAMNLEDELEETEIEGFFSQVQTLFCHDAVYNQLVQVTASSVRLVSSTSRMLL
DEWKAPSGFSVNVATANATQVLLATGGGHLVYIEIGVGKLTEVKHIQLECEISCLDINPV
GENPNHSHLAAVGMWTDISVRIYSLPGLDLITKEHLGGEIIPRSVLLCAFEGVSYLLCAL
GDGHLFNFLLNMTTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLREVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSVPLGEHARRICH
QEKTRTFAICSLKYGQSSTEESEMHFVRLLDDQTLEFISTYPLDTFEYGCSILSCSFADD
SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYIFLEKLQSNLVKV
IKGVGGLSHEQWRSFNNEKRTADAKNFLDGDLIESFLDLSRTRMEEISKAMCVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatggaattacgttgtgacggctcacaagccgaccaacgtcacgcattcatgc
gtggggaacttcacaagccctcaggaactgaatctcatcatagcgaaatgcacacgtatt
gagattcatttgcttacacctcagggtttacagcctatgttggatgtgcccatatatgga
agaattgcaacacttgaacttttccgtcctcatggtgaagcactggattttctatttatt
gccacagagagatataaattttgtgttcttcagtgggatgcagagacatctgaactcatc
acaagagcgatgggtgatgtatcagatcgcataggtcgccccacagacaatgggcagatt
ggcataattgatcctgattgtagattgattggcctccatctttatgatggcttattcaag
gttataccatttgataacaaaggacagcttaaggaagcttttaacattaggcttgaagag
cttcaagtgttggatatcaagttcctatatggttgttcaaagcctacaattgttgtcctc
taccaggacaacaaagatgcacggcatgttaaaacatatgaggtcgcactcaaagataaa
gattttgttgagggtccatggtcacaaaataatcttgataatggtgcatgtctattaata
cctgttcccatgcctcttggtggtgttatcattattggagaagaaactattgtctattgt
agtgctactgcattcaaagcaatccctactagaccatcaactacaagagcttatggaagg
gttgatgctgatggttcccgatacttgcttagtgaccatgcagggttacttcacttacta
gttatcacccatgaaaaagaaagggttactggacttaaaattgaactcttaggggagaca
tcaattgcatcaacaatatcatatctagacaatgcatttgtctatgttggatcatgttat
ggagattcacagctcataaagctaaatctccagccagatgcaaaaggctcatatgtggaa
gtcttagagaggtatgtcaatctggggcctattgtggacttctgtgtggttgaccttgag
aggcagggccaaggtcaggttgtaacttgctcaggagcttataaagatgggtcccttcgc
atagttcgaaatggtatagggataaatgaacaggcatctgtggaacttcaaggcatcaag
ggaatgtggtctttgcgattgtctactgatgatccttatgacaccttcttggtagtaagc
tttatcagtgagacacgtatcttggcaatgaatcttgaagatgaattggaagaaactgag
atcgagggtttcttttcacaagtgcaaactttgttttgccatgatgctgtgtacaatcaa
cttgtacaggtcactgcaagctctgtacgattggtcagttctacatctcgaatgctgctt
gatgagtggaaagccccttcaggattttcagttaatgttgctacagctaatgcaactcag
gttttactggctactggaggtggtcatctagtttacatagaaattggtgttggaaaattg
acagaagtaaagcacatacagttggaatgtgaaatatcttgccttgacataaaccctgtt
ggtgaaaaccctaaccacagtcatctagctgcagttggaatgtggactgatatcagtgtt
aggatatattcccttccaggtctggatctcatcacaaaagagcatttgggaggagagatt
attcctcgttctgtccttttatgtgcctttgaaggggtttcttacttgttatgtgccctt
ggagatggacatctgttcaactttttattgaacatgactactggtgagttaacagacagg
aaaaaggtttctcttgggacccagcctattacactacgcactttctcctccaagagtacc
acccatgtatttgctgcttcagataggccaactgttatctacagtagtaacaagaagtta
ctctacagcaatgtaaatttaagagaagttagccatatgtgtcctttcaactctgctgct
ttcccagacagccttgccattgcaaaagaaggtgagctcacaatcggtaccattgatgac
atccaaaagcttcacatccgctcagttcctcttggggagcatgcacggcgtatctgtcat
caagaaaagactcggacctttgccatctgtagtttgaagtatggtcagtcaagcacagag
gaatctgaaatgcacttcgttcgcttgttagatgatcagacattggagttcatatcaacc
tatccacttgatacatttgagtatggctgttccatcctcagctgttcattcgcagatgat
agtaatgtgtattattgtgttggtactgcatatgttctgcctgaggaaaatgagccaacc
aaggggcgaatactggtgttcatagttgaggatgggaagttacagttaattgcagagaag
gaaactaagggtgcagtttactctttgaatgccttcaatgggaagcttcttgctgctata
aatcaaaagattcaattgtacaagtggatgttacgggatgatggatcacatgagttgcag
tctgaatgtggacaccatggtcatatacttgcattgtatgtccaaactcgtggagatttc
attgttgttggtgatctaatgaaatcaatctcattattaatatacaagcacgaggagggt
gcaatcgaggaaagagcccgtgactacaatgctaactggatgtcagctgttgagattctt
gatgatgacatttaccttggtgcggagaacaatttcaatctcttcactgtcaggaaaaac
agtgagggtgcaactgatgaagagaggggccgccttgaggtcgttggagaataccatctt
ggtgagtttgttaaccggttccgacatggctccctggttatgcgactgccagattctgat
gttggtcagattccaacggtaatctttggcactgttaatggtgtgattggtgtcattgcc
tcacttccacatgaccagtacatcttcttggagaagctccagtcaaacctagtgaaggtc
ataaagggtgtaggagggctcagccatgagcagtggaggtcattcaacaatgagaagagg
acagcagatgctaagaatttcttggacggagatttaatagagtcattccttgatcttagc
cggactcgaatggaagagatttcaaaggcaatgtgtgtttcagtggaagagctctgcaag
agagtagaagagttgacaaggctgcattga
DBGET
integrated database retrieval system
