Nelumbo nucifera (sacred lotus): 104607996
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Entry
104607996 CDS
T04131
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104607996
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104607996
Spliceosome [BR:
nnu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104607996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
AAA_16
Motif
Other DBs
NCBI-GeneID:
104607996
NCBI-ProteinID:
XP_010272118
UniProt:
A0A1U8AVU1
LinkDB
All DBs
Position
Un
AA seq
1187 aa
AA seq
DB search
MVWKAGSMLIHGSIPAMRTLALCSYPSDFSHLFPLIFNHKATLFLHPHNNSTRKLGFLCP
QTVRTSNTGPTLFLPLRNSLRSSFPVDNQLSDADDEDDEDDEAADEHEEFAVDVSDEDEP
VEDTASSTIPTTSPRFEEHKWQRVERLRSEVREFGEGIIDLDELASIYDFRIDKFQRLAI
QAFLRGSSVVVSAPTSSGKTLIAEAAAAATVARGRRLFYTTPLKALSNQKYREFRETFGE
SNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSIGMVSSGSGLFHVDVIVLDEVHYLSDI
SRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGTTELVTSSKRPVPLTWHFS
MKNSLLPLLNEKGTSMNRKLSLNYLQFSTSGVEPYKDDKSRRRSSRRRESENYRSINMYG
QSALSKNDINTIRRSQVPQIRDTLWQLRARDMLPAIWFIFSRKGCDAAVQYLEDCKLLDE
CEMGEVQLALKKFHIQHPDAVRETAIKGLLQGVAAHHAGCLPLWKSFIEELFQQGLVKVV
FATETLAAGINMPARTAVISSLSKRSEAGRIQLSSNELLQMAGRAGRRGIDERGHVVLVQ
TPYEGAEECCKLLFAGVDPLVSQFTASYGMVLNLLAGAKITRRLKESEDMKHFQAGRTLE
EARKLVEQSFGNYVGSNVMLASKEELTKIQKEIEVLTSEVSDDAVDRKVRKQLSAITYRE
ISDLQEELRAEKRLRTELRQRMESERIASLTPLLEELENGHLPFVCLQYKDSDGVQHLVP
AVYLGKVDSLSGSRMKSMICADDSLVQTTIRTELHSGDAGGHFDAKPSHYVALGSDNSWY
LFTEKWVKTVYRTGFPNIPLAQGDALPREIMKALLDKEEVQWEKLANSELGGLWSMEGSL
DTWSWSLNVPVLSSLSDDDEVLQMSQPYHDAVELYKEQRNRVSRLKKKIARTEGFKEYQK
IIDMTNFSKEKIERLKARADRLITRIEQIEPSGWKEFLQISNIIHEARALDINTHMIFPL
GETAAAIRGENELWLAMVLRNRILLELKPAQLAAVCGSLVSDGIKVRPWKNNSYIYEPSN
TVINIIKILDEKRSSLLQLQEKHGVKIPCELDSQFSGMVEAWASGLTWREIMMDCAMDEG
DLARLLRRTIDLLAQIPKLPDIDPVLQNNAMVASNVMDRPPISELAG
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggtctggaaggctggaagcatgctaatccatggcagtattcccgccatgcggactctt
gcactgtgttcctatccttcagacttctctcaccttttccctctcattttcaatcacaaa
gctactctttttcttcatccccacaacaacagcactcgcaaattagggtttctttgtccc
caaacagttcgcacatcaaatacaggtccaactctctttcttccactccgtaattctctg
cggtcatctttccccgtagataatcaactgtcggacgcagacgacgaagatgacgaagac
gacgaagccgcagatgaacatgaagaattcgctgtcgacgtctccgatgaagacgaacca
gtggaagacaccgccagttcgaccatcccaacgacgtcgccccgtttcgaagagcacaaa
tggcagagagttgagaggctccggtcagaagtccgagagttcggagagggaattatcgat
ttggatgaactcgcttctatttacgacttccgaatagataaatttcagaggttggctata
caggcatttttgagaggctcatcagttgtggtttctgcaccgacaagcagtgggaagact
ttgattgcagaagctgcagcagcagccacagtagctaggggaaggagactcttttacaca
acgccgttgaaagccttatccaatcagaagtaccgagaattccgcgagacgtttggtgaa
agcaatgttggtcttctcacgggagattctgcagttaacaaagatgctcaggttttaatt
atgacgacagaaattctgcgcaatatgctatatcagagtattggaatggtttcttcagga
agcggattgttccatgttgatgttattgtcttggatgaagtacactatcttagtgacata
tctcggggtacagtttgggaagagatagtgatttattgtccaaaagaggttcaacttata
tgcctttcagcaacagtggcaaatcctgatgagctggctggttggattgggcagattcat
ggtacaacagaattggtgacatcatcaaaacggccagttccattaacctggcatttttct
atgaagaattctttgttgccacttcttaatgagaaaggaaccagcatgaataggaagttg
tcactcaattatttacaattttctacttctggagtagaaccttacaaagatgataaatct
agaagaagaagctcaagaagacgtgaaagcgagaattacagaagtatcaatatgtatgga
cagtcagcactgtcaaagaatgacataaatacaatccgccgttcacaagttcctcagatt
agagatactttatggcaacttagggcaagggatatgctgccagctatttggtttattttt
agcagaaaaggatgtgatgcagctgttcagtatcttgaagattgcaaacttttggatgag
tgtgagatgggcgaagttcagctggctttgaagaagttccatatacaacatccagatgca
gttagagagactgctataaagggccttctgcaaggtgtagcagcacaccatgctggctgt
ctacccctgtggaagtcatttattgaagagctgtttcagcaaggacttgttaaggttgtc
tttgctacagaaacacttgctgctggaattaacatgcctgctaggactgctgttatttca
tctctcagtaaaaggagtgaagctggacgaatccagttaagttcaaatgaactgcttcaa
atggctggacgtgctggacgtcgaggtattgatgaaaggggtcatgtggttcttgttcag
actccctatgaaggagcagaagagtgctgcaagcttctttttgctggagtggatcctctt
gtttcacagtttactgcttcttatggaatggttctgaatcttcttgcaggtgcaaaaatc
actcgcagattgaaggaatcagaggacatgaaacattttcaagcgggacgaacgttggaa
gaagctaggaagctagttgagcaaagctttggaaactatgttgggagcaatgtcatgctt
gcatccaaagaggagctcacaaaaatacagaaagagattgaggtgttaacttcagaagtt
agtgatgatgctgttgataggaaggtccgaaagcagctctctgcgatcacatatagggaa
atatctgatctgcaggaggaattacgggcagagaagcgacttcggacagagctgcgacaa
agaatggaatcagagagaattgcatctttaactcctctattggaggagctggaaaatgga
cacttaccctttgtgtgtctgcagtataaagatagtgatggggttcaacacttagtccct
gctgtttatctggggaaagttgattccctttctggttcaagaatgaagagcatgatttgt
gctgatgattctttagtgcaaactaccatcagaacagagttacactctggagatgctgga
ggacactttgatgctaaaccatctcattatgtggcccttggttcagataactcttggtat
ctctttacagagaagtgggttaaaacagtttataggactggctttcctaatattccttta
gctcagggtgatgctttgcctcgggaaattatgaaggctcttcttgataaggaagaagta
cagtgggagaagcttgctaattctgaacttggaggcttgtggagcatggaaggatccctt
gatacatggtcttggagtttaaatgttccagtccttagcagcctttcagatgatgacgag
gtgctgcaaatgtcgcaaccatatcatgatgctgttgagctgtacaaggagcaaaggaat
agggtttcccgattgaagaaaaagattgcacgtactgaaggctttaaagaatatcaaaag
atcatagatatgactaacttctccaaggaaaagattgaacgtttgaaagctagagcagat
cgtctaattactcgaatagagcaaattgaaccatctggttggaaggaattccttcagatc
agcaacattatacatgaagccagagcattggatatcaatacacatatgatatttccactt
ggtgaaacagcagcagcaattcgaggagaaaatgaactttggcttgcaatggtgctccgg
aatagaattttactagaattaaagcctgcacaacttgctgcagtttgtggtagtctagtt
tcagatggaatcaaagttcgtccttggaaaaataacagctacatatatgaaccttcaaat
actgtaatcaatatcattaagattttggatgagaaaaggagctcccttttgcagcttcaa
gaaaagcatggagtaaagataccttgtgaattagatagtcaattctctggaatggttgaa
gcctgggcttctggtttaacttggcgggaaattatgatggactgtgcaatggatgaaggg
gatttagctcgcctcttacgaagaacaattgatctattggctcagatccccaaattgcct
gatattgatccagtactgcaaaacaatgcaatggttgcatcaaatgtcatggaccgtcca
ccaataagcgaacttgctggataa
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integrated database retrieval system
