KEGG   Nelumbo nucifera (sacred lotus): 104609156
Entry
104609156         CDS       T04131                                 
Name
(RefSeq) polyubiquitin 9
  KO
K03873  elongin-B
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104609156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nnu04121]
    104609156
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104609156
Ubiquitin system [BR:nnu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     104609156
   Cul5 complex
     104609156
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104609156
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_2 DUF2604 UCH_UBL1 Rad60-SLD_2 Ubiquitin_5 DNA_pol3_delta
Other DBs
NCBI-GeneID: 104609156
NCBI-ProteinID: XP_010273690
UniProt: A0A1U8BBV1 A0A822ZPS3
LinkDB
Position
Un
AA seq 104 aa
MAMYIRVKRNKTTYFIQCDPTETILDIKQKLQNLIDQPVNDQRLILVATGEVLDDSKTLA
DQKVENDCIVALTLRKDDNEFEDVNIIRPDDFYQSRDADGGLNW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggctatgtacatacgtgttaagcgtaataagacaacctacttcattcagtgtgatcct
acggagacaatattagacattaaacagaagttgcaaaatctcattgatcagcctgtaaat
gatcaacgtttaatccttgtggcaactggtgaggttttggatgattcaaaaacattggca
gatcagaaggttgaaaatgattgtattgtggctctgaccctgagaaaagatgataatgag
tttgaggatgtcaacattatacgaccagatgatttttaccaatcccgggatgcagatggt
ggtctgaattggtaa

DBGET integrated database retrieval system