KEGG   Nelumbo nucifera (sacred lotus): 104610057
Entry
104610057         CDS       T04131                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104610057
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104610057
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 ResIII DEAD RING_XB3-XBAT31 zf-RING_5 Prok-RING_4 zf-RING_4 zf-ANAPC11 UBA
Other DBs
NCBI-GeneID: 104610057
NCBI-ProteinID: XP_010274822
UniProt: A0A1U8BDT1
LinkDB
Position
Un
AA seq 1191 aa
MAMVVAGEKEYIATVRSIVGDNVLESDILRALSVCGNSVNAAIKVILNTPGFIAPSITVK
RTLTITGARISTQIKQEGSEDSSQDDPVKGLDPKIRVKEENLDMVLASESSTEIVPAKGL
ELATRVKEEKPDMGFENEVHMKADPVKELGVMIRVNEEPDMGSQNEAPMEVDPVKVSEAI
LVVKEEKPDTSFENKVSVKEETATSDMAXALVPKGDVIIIKDEELDMGLQDKASMKKEPV
RAHRVEPVIPRKETSANTRLPAHPRPFQGXKVKKEMIVSVPVEDGEFPEEPDWFLVGRTT
VVGLSTCKGRKLQFNEIVHFAFPSDRRNYERQWVSNRAAAAVSEIVRFSTKQNGEIGRLP
MDWARIVIPLVNSSKVKVCGRCIATPENLNLMQEIVLYVSFYIHSSIFTEGDKSSWKLEV
LPHFDSTLYPLPALFKLLKIKPYQKAEFTPEDLDNRKRSLNLEGDSDETAPLFPLLKRKK
GDQHPEQSNDEQVISESALNKLVGTADTYNLEEMDPPKTLTCDLRPYQKQALYWMTEAEK
GIDVEQAAKTLHPCWSAYRICDKRASAIYVNNFSGEATTQFPSATKMARGGILADAMGLG
KTVMTIALILANRGRGKPDDEEDFMVTDTAANYEKTNRSNKTFKTKAPATVKAGTLIVCP
MALLGQWKDEIETHSEPESLSIFVHYGGDRTNDPKVLSGYDVVLTTYGVLTVAYKNDSNE
SIFHKVQWFRVVLDEAHTIKSSRTLGALAAFELNAHCRWCLTGTPLQNNLEDLYSLLRFL
HVEPWCNWAWWHKLIQRPYESGDERGLKLIKAILRPLMLRRTKETKDKEGRPILVLPPVD
IKTIECEQSEAERDFYEALFKRSKVQFDQFVAQGKVLHNYASILELLLRLRQCCNHPFLV
MSRGDSQQYADLNKLARRFLEINSDFANPNQMLPTRAYVEEVVEGIRRGENTECPICLEY
ADDPVLTPCAHRMCRECLLSSWRTPSNGLCPICRMPLKKNELITCPSENRFRVDIEKNWK
ESCKVSKLLDCLEHIRRKGPGEKSIIFSQWTSFFDXLEIPLRKKGIGFLRFDGKLSQKQR
ERVLREFSETNERRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQK
RRVCVRRFIVKDTVEERLQQVQARKQRMIAGALTDQEVRTARIEELKMLFR
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggcgatggtagtcgccggagaaaaggagtacattgcaacagttagatcaatcgtcgga
gataatgtgctggaatctgatattctccgtgctctttcagtctgcggcaacagcgtaaat
gcagccattaaggtcattctcaatacgccggggtttatcgcaccttctattactgtaaag
cggactctcactatcactggagctcggatttctacccagataaagcaagagggatctgaa
gattccagccaagatgatcctgttaaagggttggatcccaagattagagtgaaggaggag
aatctcgatatggttcttgcaagtgaatcgtcaacagaaattgtccctgctaaggggttg
gagttggcgacaagagtaaaggaggagaaacctgatatgggtttcgagaatgaagtgcat
atgaaagcggaccctgttaaggagttgggggtgatgatcagagtaaatgaggaacctgat
atgggttcccaaaatgaggcaccgatggaagtcgatcctgtcaaggtgtcggaagcgata
ctagtagtaaaagaagagaaacctgatacaagtttcgaaaataaggtatcagtaaaggaa
gaaacagcgacgtcggacatggctcyggcgttggtaccgaaaggggatgttatcataatt
aaagatgaggaactcgatatgggtcttcaggataaagcctccatgaagaaagagccagtg
cgtgcccatcgagttgaaccagtgatacccaggaaagaaacatcagcaaatacccgcctt
cctgctcatcctcgtccattccagggwrgtaaagtgaagaaagaaatgatagtttcagtt
ccagtggaggatggggagtttcccgaagagccagattggtttttggtgggaaggactact
gtggtgggtctctcaacgtgcaaagggaggaaactgcagttcaatgagatagtccatttt
gcatttccttctgacagaaggaattacgagaggcaatgggttagcaacagggcggctgct
gcggtctctgaaattgttcgcttctcgaccaagcaaaatggagagattgggaggctgcca
atggattgggctagaatcgtaattccccttgtaaattcttcaaaggttaaggtttgtggt
cgatgtatagctacgccagaaaaccttaatttgatgcaagaaatcgtactgtacgtaagc
ttttacattcacagttctatttttactgagggtgataagtcttcatggaagttagaagtt
cttccacacttcgactctactctttatcctcttcctgctcttttcaaattgctgaaaatt
aagccatatcagaaggcagaatttaccccggaggatcttgacaatcgaaaacgttcctta
aacctagagggtgattcagatgaaactgcaccactctttcctcttttgaaacgaaaaaag
ggggaccaacatcctgagcaaagtaacgatgaacaagttatctcagagtcagctctaaat
aagcttgttggtactgcagatacatacaatttggaggaaatggatcctccaaaaacactc
acktgtgatctaaggccatatcagaaacaagctctttattggatgacagaagcagagaag
ggaattgatgttgagcaagcggccaaaacacttcatccatgttggtcagcctaccgtata
tgtgataagagagcatctgcaatctatgttaacaatttctcaggtgaagctactacacaa
tttcccagtgcaaccaaaatggctagaggagggattttagcagatgctatgggacttgga
aaaacggtgatgacaattgcattaatacttgcaaatcgaggcagaggaaaacctgatgat
gaagaagatttcatggtcacggatactgcggctaattatgaaaaaacaaacagaagtaac
aaaacgtttaaaacaaaagccccagcaacagtgaaggctggcacccttatcgtttgtcct
atggctttgttaggccaatggaaggatgaaattgaaacccattcagagccagaatctctt
tcaatttttgtgcactatggtggggataggaccaatgacccaaaagtgctttcaggctat
gatgtggtcttaacgacatatggagtcttaactgtcgcttacaaaaatgattcaaatgaa
agcatttttcacaaagtacagtggtttagggtagtgcttgatgaggcacatactattaaa
tcctcaaggacactaggtgctctggcagcctttgaactgaatgcacattgcaggtggtgc
cttacgggtactcctttgcagaataacttggaggacctctacagccttttacgcttcctg
catgttgagccatggtgcaactgggcatggtggcacaagttaattcaaaggccttatgaa
tctggagatgaaagagggctgaaattgattaaggctatcctaaggccattgatgttgagg
aggactaaggaaacaaaagacaaagaaggaaggcccattcttgttctccctccagttgac
attaaaaccattgagtgtgaacagtctgaagctgaacgagatttctatgaagcactcttc
aagaggtccaaggtccaatttgaccagttcgtggcacaaggaaaggttctccataactat
gcgtctattcttgagctgctacttcggttgaggcagtgctgcaatcatccatttctcgtt
atgagccggggtgattctcaacagtatgcagacttgaataagctcgcgaggcggtttctt
gagatcaattctgattttgccaacccaaaccagatgctccccactcgagcttatgtggaa
gaggttgttgagggcatcaggcgaggagaaaacactgagtgtcccatctgcctggagtat
gcagatgatcctgtgctgactccatgtgcacaccggatgtgcagagagtgcctcctttcg
agctggcggaccccatcaaatgggctctgtccaatttgtaggatgccgttgaagaagaat
gaactcattacgtgtccatcagaaaatcgtttccgggttgatattgagaaaaactggaaa
gagtcatgcaaggtttcaaagctccttgattgcttggagcatatacgtcgtaagggtcct
ggtgaaaagagcatcatttttagtcagtggacttcattttttgatrtactggagatccct
ttaaggaagaaaggaattggatttttgaggttcgacggaaaattgagccagaagcagagg
gaaagggtattgagggagttcagtgagaccaatgaaagaagggtgctactaatgtcgtta
aaagcaggaggtgtaggcctaaatctgactgcagcatctaatgtctttctaatggatcca
tggtggaacccagcagttgaggagcaggcaataatgcgaattcatcgaattgggcaaaag
cgcagggtttgtgtaagaagattcattgttaaggacactgtggaggagcgcctgcaacag
gttcaagcgaggaaacagcgcatgattgcaggggccctcactgatcaggaagttagaaca
gccaggattgaagagctcaagatgctatttagataa

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