KEGG   Nelumbo nucifera (sacred lotus): 104610372
Entry
104610372         CDS       T04131                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104610372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nnu03021]
    104610372
Enzymes [BR:nnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104610372
Transcription machinery [BR:nnu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104610372
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 104610372
NCBI-ProteinID: XP_010275247
UniProt: A0A1U8BFK4 A0A822XGJ6
LinkDB
Position
Un
AA seq 1201 aa
MSETDAMEDSGISSEGEELENGNNMEIDEKGAMGIKEKLNLSEQYLSKFCREASMAFFKE
FGLISHQINSYNDFIENGLQTLFDSLGEIKVGPGYDPSKKGGGGWRHASIKFGKVTVDRP
NFWTGEKFSSEKSDKEYLKLLPRHARLQNMTYSARLKAEVRVQVYTVNLINSDKFKSGQD
KIIQNDVKSDDNYVVVLGRIPVMVRSSLCWMNELGKSDCDFDHGGYFLIKGTEKTFIAQE
QICLKRLWVSSKPSWMVSYRSNLKKRRVYIKLIETPKPEYLQGGNVLNVYFLSSTIPLWI
LFFALGASSDKEIVEMIDLDISDATFVNILLSTICDADEKCEGFRKEGKALKHIDELIKN
TKFPPTDSIEDILNNSLFPALSSYREKALFLGYMVKCLLLSYTGRRKCENRDDFRNKRLE
LAGDLLERELRVHIRHAQRRMTKAMQKDLYGDRALHPIEHYLDASIITNGLTRAFSTGAW
SHPFNTGERLSGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARFPNPSHWGKLCFLS
TPDGENCGLVKNLAITGLVSTNSVEPLLDILLNCGMEKLVDCNSPASVSGKDKVFLNGEW
IGVCIDSAKFVRDLRNKRRSKEIPHQVEIKRDQQQGEVRIFSDAGRILRPLLVVENLRKI
KEFKGGYSFQSLLDKGVLELVGVEEEEDCQTAWGVKYLLMRGKDEPPVNYTHCELDLSYL
MGLSCSLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTM
VSDCLGRPEYPQGHNGVLPRPEYFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRTE
HIRSYKADVDNSELFDNNKRQRPKDRVDFGKIQSKFGRVDSLDDDGFPFIGANLQAGDIV
IGRSAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLRQVRSPSLGDKFSSMHGQ
KGVLGFLESQENFPFTLQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSMRYATP
YTAASIDVITDQLHRAGYSRWGSERIYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFR
NTGPVHPLTRQPVSDRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICRKC
TNLANVIQRPVPGGKKIRGPYCRFCESAENIVRVNVPYGAKLLCQELFSMGISVKFETEV
C
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgtcggagacagacgctatggaagattcagggattagtagtgaaggcgaagagttagaa
aatggtaataacatggagatagatgaaaaaggagcaatgggtattaaggagaagctcaat
ttgagcgagcagtacctgagtaagttctgtcgggaagcttcaatggccttcttcaaggag
tttggtttgataagtcaccagataaactcatacaacgacttcattgagaacggacttcag
acactcttcgactcccttggcgagatcaaagttggtccagggtatgatccttccaagaag
gggggtggagggtggaggcatgcgtccatcaaattcgggaaggtgacagtagatagaccg
aatttctggacgggggagaagttttcgtctgagaagagcgacaaggaatatctgaagttg
ttgccgagacatgctcgacttcagaacatgacctattcagctaggctgaaggccgaagtt
agagttcaggtctatactgttaacctcattaacagtgacaaatttaaatctggtcaagat
aaaattatccaaaatgatgtcaaaagtgatgacaattatgtagttgtgttgggaagaatc
cccgtgatggtgaggtcaagtctttgttggatgaatgaacttggaaaaagtgattgtgat
tttgatcatggaggctattttttgatcaagggtacagaaaagaccttcattgcacaagaa
cagatatgcttgaagagactctgggtttctagtaaaccaagctggatggtttcatatcgt
tccaatttgaagaagagaagagtatatataaaactaatagaaactcctaaacctgaatat
cttcaaggagggaatgtccttaatgtgtatttcttgtcttctacaattcccctttggatt
ttgttttttgcacttggtgcttcatcagataaggagattgttgaaatgattgatcttgat
attagtgatgccacttttgtaaatatattgctctctaccatatgtgatgctgatgagaag
tgcgagggtttccgtaaagaaggaaaagctctcaaacatatagatgaactaattaaaaac
acaaaatttccacctacagatagtatagaagacatcctgaataattccctatttcctgct
cttagcagctatagagaaaaagctctgtttcttggatatatggtaaagtgtcttttatta
tcctataccgggcgaagaaaatgcgagaacagggatgactttaggaacaaaaggttagag
ctagctggtgatttgcttgagcgggagctgagggtgcacatcagacatgctcagagacgg
atgaccaaagctatgcagaaagatctgtatggagaccgtgccttgcaccccattgaacat
tatttggatgcttcaattattacaaatggtcttaccagggcattctcaactggagcttgg
tcacatcccttcaatacaggtgaaaggctgtctggtgtagtagcaacacttaggcgaaca
aatcccctgcaaatgacagctgatatgaggaaaacacgacagcaggttcaatacactgga
aaggttggagatgctagattcccaaacccttcccattggggaaaattgtgctttctttct
acaccagatggggaaaactgtgggctcgtaaaaaatttagctatcacaggacttgtgagt
acaaattctgtggagcctttgttggacatattattgaattgtggtatggagaaactggta
gactgtaattctccagcttcagtgagtggaaaggataaggttttccttaatggagagtgg
attggtgtttgtatagattctgccaaatttgttagggatctgagaaataagcgtaggagt
aaggaaatcccacaccaggtggagattaaaagggaccagcaacagggtgaagtgcgaata
ttttccgatgctggtagaatcctacggcctcttttagttgttgagaatctaaggaagata
aaagaatttaaaggaggctacagctttcagtctcttttggacaaaggagtactagagctt
gtaggggtagaagaagaagaggattgtcagactgcatggggtgtaaaatacctcttgatg
agaggtaaagatgagccacctgttaattatacacactgtgagcttgacctttcttactta
atgggcttaagctgtagccttatcccttttgcaaaccatgaccatgctagaagggttctt
taccaatctgagaaacactcgcagcaggccattgggttctctacaacaaacccgaatatt
agagttgatactctttctcaccagttatattacccccagaggccacttttcagaaccatg
gtctctgattgccttggaagacctgagtatccccaaggtcataatggagtccttcccagg
ccagagtatttcaatggccagaatgctattgtggctgttaatgttcatctaggttacaac
caagaagattcattggtcatgaatcgggcttctttagagcgtggcatgttcagaacagaa
cacatcaggagttacaaggctgatgtcgacaacagtgaattgtttgataataataaacgc
caacggcccaaggatagagttgattttggtaaaatacagagtaaatttgggcgtgttgac
agtcttgacgatgatggatttccatttattggggcaaacttgcaggctggtgacatagtc
attggtaggagtgcagaatcaggggctgatcacagtatcaaactgaaacacacagaaaga
gggaaggttcaaaaagttgtgttatctgctaatgatgatggaaagaactttgcagtggta
tcactaagacaggtacgatcgccatctcttggggacaagttctcaagcatgcatggtcaa
aagggtgttctgggatttttggagtctcaagagaatttcccatttactcttcaaggcata
gttccagatattgtgataaacccacatgcatttccgacacgtcaaactcctggccagctg
cttgaggcggctttggggaaggggattgcttgtggtgggtcgatgagatatgccacccct
tacactgctgcttctatcgatgtcatcactgaccagctgcacagggctggatattcaaga
tggggaagtgagagaatttataatggccgaactggtgaaatgatgcgttctttgatattc
atgggcccaacattttatcagaggctgatacatatggctgaagacaaggtaaaatttagg
aacacaggaccagtgcacccacttacccgacaaccagtgtcagaccggaagcgttttggt
ggggtcaaatttggtgagatggagcgtgattgcttactggcccatggtgctgcggccaac
ctacatgaacgtctattcatgctcagtgatttctcacagatgcacatatgtcgcaaatgc
accaaccttgcaaatgtgatccagagaccagtacctggaggcaagaagatccgaggtcca
tactgccgattctgtgagtctgcggagaacattgtaagggtgaatgtgccttacggtgcc
aagctgctgtgtcaagaactttttagcatgggcatatccgttaaatttgagacggaagtg
tgctga

DBGET integrated database retrieval system