Nelumbo nucifera (sacred lotus): 104610720
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Entry
104610720 CDS
T04131
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104610720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104610720
03036 Chromosome and associated proteins [BR:
nnu03036
]
104610720
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104610720
Coactivators
SAGA/TFTC/STAGA complex
104610720
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104610720
STAGA complex
104610720
TFTC complex
104610720
SAGA complex
104610720
SLIK complex
104610720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_VPS8
Cytochrom_D1
LisH
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
104610720
NCBI-ProteinID:
XP_010275775
UniProt:
A0A1U8BG05
A0A822ZGH6
LinkDB
All DBs
Position
Un
AA seq
664 aa
AA seq
DB search
MEDEEIEKMVIAYLKKKGFKQTELALQEEQSKSSFASQTDPDKQILSVTESESGPAQYQD
GYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHTQEARAFFNSFREDHELMHL
RDLQKLEGVLSPSHLEEMEFAHSLRQSKISIKMCQYSYELLVQYLQKSQSITILGIINEH
INFEVSPGQPSTISDDADVVTLLGSSQDTSKLINQKEIRWGLLEDSLEERLEKAGALMSD
SEKPEGETKEGEVEENKKKSVDGGKQGASVKKLKKDKVVGTTGKSIRSETNIVSMAPRVK
PELSLPEIPTEVEHSILEDLRNRVQLGSLALPSVSFYTFINTHNGLNCSSISHDGSLVAG
GFSDSSVKVWDMSKIGQQSDTSIMQGENDSASIEHLMGPEDGKRSYTLFQGHAGPVYSVK
FSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTAR
IWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRS
MVLSLAMSPDGRYMTSGDEDGMIMMWDLSSGRCVTPLMGHTSCVWTLAFSREGSLLASGS
ADCTVKLWDVTASTKVARTEENKSGAMNRLRSLKTLPTRSTPVYTLQFSRRNLLFAAGVL
SKGV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggaaatcgagaaaatggtgattgcatacctgaagaagaagggcttcaag
caaacggaactcgccctacaggaagagcaaagcaaaagctcctttgcttctcagaccgat
cccgacaaacagatcctttctgttactgaatcagagagtggtccagcacagtatcaagat
ggatatagcaagctaagatcatggacatatagctcactggatctatataagcatgagttg
cttcgtgtgctttatcctgtatttattcattgttttatggatcttgtggcgaaggggcat
acccaagaagctcgagcatttttcaatagctttcgtgaagaccatgaattgatgcactta
agggaccttcaaaagttggaaggtgttctttcgccctcacatctggaggagatggaattt
gctcattctttgaggcagagcaaaattagtataaagatgtgtcagtactcgtacgaactt
cttgtgcaatatctacagaaatcacagtcgattactattcttggaataatcaatgagcat
attaattttgaagtttcacctggtcaaccaagcacaatttctgatgatgccgatgtggta
accctgcttggaagcagccaagatacatctaagctgataaaccagaaggaaatacgttgg
gggttgcttgaagattccttagaagagcgtctagagaaggcaggggctttgatgtcagat
tctgaaaagcctgaaggagaaaccaaagagggagaagtggaagagaacaagaagaaatca
gtggatggaggcaagcaaggtgcttcagtcaagaagttgaaaaaggacaaagttgttggt
acaacaggaaaaagcattcgttctgagactaatattgtatccatggctccccgggttaaa
ccagagctttcattgcctgaaataccaacagaagttgagcattctattcttgaggaccta
aggaaccgtgtacagttgggtagcttggccctgccatcagtcagcttctatacattcatt
aatacacataatggtttaaattgttcatcaatatcacatgatggatccttggttgctggt
ggattctcagactcatcagtaaaggtttgggacatgtcaaagattggacaacaatctgat
acttctatcatgcagggagagaatgactcggctagtattgaacatttgatgggaccagag
gatggaaaaaggtcttatacactgtttcagggtcatgctggacctgtttattcagttaaa
tttagtccacttggggattttattctttcttcatcagcagactcaaccattcggttatgg
agcaccaagctaaatgcaaatcttgtttgctacaaaggtcataattatcctgtctgggat
gttcagtttagtcctgtggggcattactttgccagctcttcacatgatcgtactgccaga
atttggtcaatggacagaatccagcctttaaggatcatggcagggcatctatctgatgtt
gattgtgtgcagtggcatgcaaactgtaactacattgcaactggatctagtgataagaca
gttagattatgggatgtccagagtggggagtgtgtgcgcattttcattggtcacaggagt
atggttctatcattggcaatgtcacctgatggtcggtatatgacatcaggagatgaagat
gggatgatcatgatgtgggatctctcaagtggtcgttgtgttacacctttgatggggcat
acctcttgtgtatggacacttgctttcagtcgtgaaggctctcttctggcgtctggatct
gctgattgcactgtaaaactgtgggatgtgactgcaagcacaaaggtggcaagaacagaa
gagaacaaatccggagctatgaatagactgaggtcattaaaaactctaccaaccagatca
actccagtttatactctccaattctctcgaaggaatcttctatttgcagctggggtgctt
tcaaaaggtgtataa
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integrated database retrieval system
