Nelumbo nucifera (sacred lotus): 104611168
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Entry
104611168 CDS
T04131
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104611168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104611168
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104611168
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104611168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
ABM
Motif
Other DBs
NCBI-GeneID:
104611168
NCBI-ProteinID:
XP_010276413
UniProt:
A0A1U8QBW3
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Position
Un
AA seq
892 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDCFEADIEGLSVKKGKARPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVRDFLEDYVERNQEDFEEFSDVDELYNSLPLDKVES
LEDLVTIGPPGLAKGVGSASAVLSLKTSIAASPTQTLATSSSTVQQGTLNQDQAEETASQ
DSNSDIAPRTPPSKNGVVGSGASLIAAGSHATTLTSNISTRNLASGSTASAILSTPGSIR
GVLDTSAATVSPSPVNLSNSTKEEDNTSFASRRSSPSLAETGIGRGIGRGSIGGVSSQTS
NNTPLGSGSILPSNGALGAVPAVPDMSKKNTLGADERTGSSGIMPPLVSPLSNRMLLSQV
SKGNDGTVSADSINVSEGVGGRTFSPSVVPGAQWRPGSSFPSQNDAGQFRVQPDQREKFL
QKLQQVQQHSQLAGGNHMQFNAQQQSSLLQQFNSQNSLSPHIGLGLGVQGPGLNAVASAS
LQQPNLIHQQSTQRALSSPVPKESDVGHNKVDDQQQQNPSDDSSGEPTTSSGVNKNLMNE
DDLKTPYSVDTPVGGSGSLVEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSVSDLGAI
GDNLSGSTANSAGMHDHTYNMQMLEAAYYKLPQPKDSERAKSYTPRHPAVTPLSYPQVQS
PIVDNPAFWERLGVDTMGTDTLFFAFYFQQNTYQQYLAARELKRQSWRYHRKYSTWFQRH
EEPRVTTDECEQGTYVYFDFHIGNDDLQHGWCQRIKTEFTFEYSYLEDELVV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagtcgaaaattacagggtgagatcgatcgagttctaaagaaggtccaagaa
ggtgtcgatgtcttcgatagcatttggaacaaggtttacgacaccgataatgcgaaccag
aaggagaaattcgaggcggatttgaagaaggagattaagaaacttcagagatacagagac
cagataaagacatggatacaatctagcgagataaaggacaaaaaggttagtgcctcttat
gagcaggctctgctggatgctcgcaagcttattgagcgtgaaatggaaagatttaaggtt
tgtgaaaaggaaactaagacaaaagctttctcaaaagaagggcttggacaacaacccaaa
actgatccaaaagagaaggcaaaatcagagacaagggattggctaaacaatgtggtttct
gagctggagtctcaaattgattgctttgaagctgatattgaggggctctctgtaaagaaa
ggaaaagcaagaccacccagactgacccatttagagacctctattaccaggcataaagct
cacataatgaagttagaattgattttgagactactggataacgatgaattgagtcctgag
caggtcaatgatgttagagacttcttagaagattatgttgaacgcaatcaggaggatttt
gaagaatttagtgatgttgatgagctttacaattctttaccattagacaaagtggagtcg
cttgaagatctggtcacaattggtcctcctggccttgctaagggtgttggttctgctagt
gcagttttaagcttgaagacttccatagcagcttcaccaactcaaacactggccacatca
tcatctactgttcaacaaggtacattgaatcaggaccaagctgaagagacagcttcccag
gacagtaattctgatattgccccaaggactccaccttctaaaaatggtgtagtgggttct
ggggcttcattgatagcagcagggagtcatgcaactacgcttactagcaatatttcaaca
cgtaatttggctagtgggtcaactgcttcagcaatcctttcaactccggggtctattcgt
ggtgttctggatacttctgctgctaccgtttctccatccccggtaaacttgtctaattct
acaaaggaggaagataacacaagctttgctagtcggagatcgtcaccatctcttgctgaa
actggtatagggagaggaattggtagagggtctataggtggtgtatccagccaaacatca
aataatacacctctaggttctggcagtatacttcctagcaatggagcacttggggcagtt
cctgcagttcctgacatgtcaaagaagaatactttaggtgctgatgagagaacaggaagc
agtggtatcatgccaccattggtttcccctctaagcaatagaatgctcttgtcacaggtc
tctaaggggaatgatggaactgtttctgctgattctattaatgttagtgagggtgtaggt
ggcagaactttctccccttcagtagttccaggtgcccaatggagacctggaagttcattt
ccaagtcagaatgatgcgggtcaatttcgtgttcaacctgatcaaagggagaaatttttg
cagaagctccaacaagttcagcaacattctcaacttgctgggggaaatcatatgcagttc
aatgcacaacagcaaagctcactattacaacagttcaattctcaaaactcattatcgcct
catattggactgggtcttggagttcagggaccaggtctaaatgctgttgcatcagcttca
ttacaacagccaaatttaattcatcaacaatccactcagcgtgctttgagttctcctgtg
ccaaaagaatcagatgttggccacaataaagttgatgaccagcagcaacaaaatccatct
gatgattcaagtggggaacctactacaagttctggggtgaacaaaaatctcatgaatgag
gacgatctgaagactccatactcagtagacacacctgttggaggatctggttctttagta
gaacctgcccaggtgccaagagatactgacctctctcctggacaaccattgcagtccaat
caaccttcacttggtttgggtgtcattggtcgaaggagtgtttctgatcttggtgcaatt
ggcgataacctcagtggatccactgcaaattctgctggaatgcatgatcacacatacaat
atgcagatgcttgaggctgcatattacaagcttccccaacccaaagactcagaacgtgca
aagagctatactccaagacatcctgcagtaacccctctgagctatcctcaagtgcagtca
cccattgttgataatcctgccttctgggaacgcttaggtgttgatactatgggaactgat
accttgttctttgcattttactttcaacagaatacttatcagcaatacttggctgcaaga
gagttgaaaaggcaatcatggagataccacaggaaatatagtacatggtttcaacgtcat
gaggaacccagagtcacaactgatgaatgtgaacaggggacttatgtgtactttgatttc
catattggcaatgatgacttacaacatgggtggtgccaaaggattaagactgaattcact
tttgagtacagttaccttgaagatgagcttgttgtatag
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