Nelumbo nucifera (sacred lotus): 104611420
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Entry
104611420 CDS
T04131
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04120
Ubiquitin mediated proteolysis
nnu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104611420
04120 Ubiquitin mediated proteolysis
104611420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104611420
Enzymes [BR:
nnu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104611420
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104611420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104611420
NCBI-ProteinID:
XP_010276745
UniProt:
A0A1U8B6Y3
LinkDB
All DBs
Position
Un
AA seq
553 aa
AA seq
DB search
MMRLQTYAGLSLVGTLAVIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL
TKCLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMFSHIRIVSFMGFLFVLDSIFLYSSLKHLIQTWQASVSIFFSFEYM
ILATTIVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFFLIFVNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNANDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTNMASGQHGAQTEVHQQDTGT
AGTSSQGSVDDVVDDNLRRHQARLQAAAAAASIYEKSYVYPSPNTFSWYPGYALIPQAYM
PSANSCTMDSDGNASGEPHNQQFATHGGQSNFVYPLAPHCPFIPLQSAGANFTGQRLGTD
LNAECSCLESQERFILHQIEILQNQQKLLRQQKPDETMNMTSTSSDSKGKANASPSSFPS
VSDYGHHGEDEKQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatgagactccaaacatatgcgggccttagtttagttggtacacttgctgttatttat
catgcgtttagcagtaggggtcaattctacccagccatggtgtatctatccacctccaag
atcagtttggtgcttcttttaaatatgggtctggtcatcatgtgcattttgtggcagtta
accaagtgtttgttccttggatctctacgagaagcagaggttgagagattgaatgaacag
tcatggagggaggtcatggaaattctttttgcaatcacaatattccgacaggacttctct
gttacatttcttgcaatggtgactgctctcctgttaattaaagctttgcattggttggcc
cagaagagggttgagtacattgagacaactccatctgttcccatgttctctcacatccgg
attgtttctttcatgggatttctttttgtcctggatagtatcttcttgtacagttctttg
aaacatttgatacagacatggcaggcttctgtttctatttttttctcatttgagtacatg
atactagcgacaacaatagtgtcaacatttgtaaaatatgttttctatgttagtgacatg
ctgatggaaggacaatgggagagaaaggcagtttacaccttttacttggagcttatccgt
gacttgcttcacttatctatgtacctgtgcttcttctttctgatttttgtgaattatggt
gtgccattgcatttgattcgtgagctctatgagacctttcgtaacttcaagattcgtgtt
gctgattatattcggtatcggaaaatcacttcaaatatgaatgaccgttttcctgatgca
acacctgaagaacttaatgctaatgatgctacttgcattatttgtcgtgaagagatgacc
acagcaaagaagctcatctgtggccaccttttccatgtgcattgtcttaggtcatggttg
gagcgacaacatacttgcccaacatgcagagcgttagttgttccacctgaaaatgggaca
aatatggctagtggccaacatggagcacagactgaggttcatcagcaggacacaggaact
gctggtacatcctctcagggttcagtagatgatgtagtggatgacaacttgaggcggcat
caggctaggctacaagctgctgctgcagctgcttcaatctatgagaaatcatatgtatat
ccttctccaaatactttttcatggtatcctggatatgctttaattccccaggcatatatg
ccttcagcaaactcctgcactatggattcagatggaaatgcatctggggaaccacacaat
caacaatttgcaacccatggtggacagtcaaactttgtgtatcctctggctcctcactgc
ccattcatccctcttcagtctgctggtgctaattttacagggcagaggctgggtactgat
ctaaatgcggaatgttcttgcctggaatcacaagaaagatttattctgcaccagattgag
attctgcaaaaccaacagaagcttttgcgacagcaaaaacctgacgaaaccatgaacatg
acttccacttcatcagatagcaagggaaaggccaatgcatctccatcctcattcccatct
gtttctgactatggtcatcatggagaggatgagaaacagtaa
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