Nelumbo nucifera (sacred lotus): 104613424
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Entry
104613424 CDS
T04131
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
nnu03015
mRNA surveillance pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104613424
09122 Translation
03013 Nucleocytoplasmic transport
104613424
03015 mRNA surveillance pathway
104613424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104613424
03041 Spliceosome [BR:
nnu03041
]
104613424
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104613424
Spliceosome [BR:
nnu03041
]
Complex C
Other components
EJC/TREX
104613424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
104613424
NCBI-ProteinID:
XP_010279535
UniProt:
A0A1U8BDL6
LinkDB
All DBs
Position
Un
AA seq
199 aa
AA seq
DB search
MAAADVEAVDFEPEEDDLMDEDGAVDVETSPRAPLPKLKSAITGGSSSFSAPKKTKGRGF
REETDAERNSRFAANNFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNTFGEFGE
VKNLHLNLDRRTGFVKGYALIEYENFEEAQAAISAINGTELLTQTIYVDWAFSNGPFKRR
NMRRRSPRGHRSRSPRRRY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcagatgttgaagctgtagacttcgagcccgaagaggatgatctcatggac
gaagatggggccgtcgatgtcgaaacgtcacctagagctcctctccccaagctcaaatct
gccatcaccggtgggtcgtcctccttctctgctccaaagaagaccaaaggtagaggtttc
cgagaagaaacagatgctgaacgtaacagtcgttttgccgcgaacaatttcgactccttg
gactcggatggcggccctggtccccaacgatccattgaggggtggatcattttggttact
ggagtacatgaagaggcacaagaggatgatctccaaaatacctttggtgaatttggggag
gttaagaacttgcatctaaatcttgatcgtcgcacaggatttgtcaagggctatgcacta
attgaatatgagaattttgaggaggctcaggctgccatatctgcaataaatggaactgag
cttcttacccagaccatctatgttgattgggccttcagcaatggacctttcaaaaggagg
aacatgaggaggaggtcaccccgtgggcaccgatcaaggagtcctaggaggaggtattga
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