Nelumbo nucifera (sacred lotus): 10743915
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Entry
10743915 CDS
T04131
Symbol
rpoA, N623_p033
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
10743915 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
10743915 (rpoA)
03400 DNA repair and recombination proteins [BR:
nnu03400
]
10743915 (rpoA)
Enzymes [BR:
nnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
10743915 (rpoA)
Transcription machinery [BR:
nnu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
10743915 (rpoA)
DNA repair and recombination proteins [BR:
nnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
10743915 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
FKBP26_C
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
10743915
NCBI-ProteinID:
YP_009093981
UniProt:
D3WC92
A0A0A1EQT9
LinkDB
All DBs
Position
CP
AA seq
339 aa
AA seq
DB search
MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDAFICVRGPGYVTAQD
IISPPSVEIVDTTQHIASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDAQEEDIQLE
DNQNKVTLPFFTFHDRLTKLRKNKKEKEIALKCIFIDQSELPPRTYNCLKRSNIHTLLDL
LNNSQEDLMKMFHFQIEDVKQILDILQKHFAIDLPKNKF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaggaaatagcagtatctactcggacactacagtggaagtgtgttgaatca
agagtagacagtaagcgtctttattatggacgttttattttgtctccgcttatgaaaggt
caagccgatacgataggcatcgcgatgcgaagggctttgcttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaagataccacacgaatattctaccatagtaggtatt
gaagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgcgacgcatttatttgcgtcaggggtcctggatacgtaactgctcaagac
atcatctcaccaccttctgtggaaatcgttgatactacacagcatatagctagcctgaca
gaaccaattgatttgtgtattggattacaaatcgagaggaatcgcggatatcgtatgaaa
acaccaaataactctcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aatgcgaatcatagtattcattcttatgggaatgggaatgagaaacaagagatacttttt
ctcgaaatatggacgaatgggagtttaactcctaaagaagcacttcacgaagcctcccgg
aatttgattgatttatttataccttttctagatgcgcaagaagaggacatccaattagag
gacaatcaaaacaaggttactttacctttttttacctttcatgatagattaactaaacta
aggaaaaacaaaaaagaaaaagaaatagcattgaaatgtatttttattgaccaatcagaa
ttgcctcccaggacctataattgcctcaaaaggtccaatatacatacattattggacctt
ttgaataacagtcaagaagatcttatgaaaatgttccattttcagatagaagatgtaaaa
cagatattggacattctacaaaagcatttcgcaattgatttacctaagaataagttttaa
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