Neobacillus novalis: QNH39_01780
Help
Entry
QNH39_01780 CDS
T09082
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nnv
Neobacillus novalis
Pathway
nnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH39_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnv03019
]
QNH39_01780
03009 Ribosome biogenesis [BR:
nnv03009
]
QNH39_01780
Enzymes [BR:
nnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNH39_01780
Messenger RNA biogenesis [BR:
nnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNH39_01780
Ribosome biogenesis [BR:
nnv03009
]
Prokaryotic type
rRNA helicases
QNH39_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
WHY86649
UniProt:
A0AA95MQT5
LinkDB
All DBs
Position
347198..348688
Genome browser
AA seq
496 aa
AA seq
DB search
MTKFEELGLSQATLDAVLKMGFEEATPIQAETIPLGLKNIDLIGQAQTGTGKTAAFGIPL
VEKVDVKRDAIQGIIIAPTRELAIQVSEELYKIGSGKRVRVLPIYGGQDISRQIRSLKKA
PHIIVGTPGRVLDHINRKTMRLDTVTTVILDEADEMLNMGFIEDIESILAATPAERQTLL
FSATMPGPIQRMAEKFMKDPQIVRVKTKEMTVPSIEQYYLEVQERNKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALTLRGYTAEGIHGDLSQAKRLSVLRKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGVALTFITPREKSYLAVVERTTR
SKMEKMKAPTLDEALEGQQKAVVEKIVQTIESNNLQYYKAAAQELLEENDASTVIAAVLK
MLTKEPDTTPIKLTEEQLPQKRDRKPQDRDRRRRDDSRGSYGGGDRNRKKAPVKPRSGEK
RTGGGKPSKPRSYNHQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagtttgaagaactgggcctaagtcaggccactttagatgctgtcctcaagatg
ggttttgaggaagcaacaccaatccaggcagaaacgatcccattgggcttgaaaaatatt
gatttgatcgggcaagctcaaacaggaacaggtaaaacagctgcatttgggattccgttg
gttgaaaaagtagatgtaaaacgggatgccattcaagggattattattgcaccaacacgt
gaacttgcgattcaagtatccgaagagctttataaaattggttcaggcaaaagagttcgc
gtgctgccaatctacggtggtcaagatatcagccgccaaattcgttcattaaagaaagca
ccacatatcattgttggtactcctggacgtgtattggatcatatcaacagaaagactatg
cgcctggatacagttactacggttatccttgatgaagcggatgaaatgttaaacatgggc
tttattgaagacattgaatcgattcttgctgcgactccagctgaacgccagacgttgctc
ttctcagcaacgatgcctggtccaattcagagaatggcagaaaagttcatgaaggacccg
caaatcgttcgtgtgaaaacgaaagaaatgaccgtaccttcgattgaacaatattatctt
gaagttcaagaaagaaataaattcgatgtattaacaagactgcttgatattcaatcaccg
gagcttgcgattgtatttggccgtacaaagcgccgtgtcgatgaattatcagaagcacta
acgttaagaggatatacagcagaaggtattcatggcgatttaagccaggcaaaacggtta
tctgtccttcgtaaatttaaagaaggttcaatcgatgttcttgtcgcaacagacgtagcc
gcaaggggtctcgatatttctggagttacccatgtgtataactttgatatcccgcaggat
cctgaaagctatgttcaccgcatcggacgtacaggccgcgcaggtaaaaagggtgtagct
ttaacatttattacaccacgtgaaaagtcataccttgctgtcgtggaaagaaccactaga
agcaagatggaaaagatgaaggctccaacgcttgatgaagcattagaaggccaacaaaaa
gcagttgtagaaaaaatcgtccaaacgattgaatcaaataatttacaatattataaagca
gcggctcaagaattgctggaagaaaatgatgcttcaactgttattgcagctgtattaaaa
atgttgaccaaagaaccggatacaactccgattaaattaacagaagaacagcttccacaa
aagagagatagaaaaccacaagaccgcgatcgtcgcagaagagacgattcgagagggtca
tacggtggcggtgatcgtaacagaaaaaaggcaccggtaaagccaagaagcggtgaaaaa
agaaccggcggcggtaaaccatcaaagccaagaagctataatcatcaataa
DBGET
integrated database retrieval system
