Neobacillus novalis: QNH39_03465
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Entry
QNH39_03465 CDS
T09082
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nnv
Neobacillus novalis
Pathway
nnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH39_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnv03019
]
QNH39_03465
03009 Ribosome biogenesis [BR:
nnv03009
]
QNH39_03465
Enzymes [BR:
nnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNH39_03465
Messenger RNA biogenesis [BR:
nnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNH39_03465
Ribosome biogenesis [BR:
nnv03009
]
Prokaryotic type
rRNA helicases
QNH39_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WHY86938
UniProt:
A0AA95SDB1
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All DBs
Position
complement(710376..711821)
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AA seq
481 aa
AA seq
DB search
MSEQSFAAYNLSDEINRAIKVLKYDTPTEVQREVLPLALENHDLVVKSQTGSGKTASFGI
PICELVEWEERNPQALILTPTRELAVQVRDDITNIGRFKRIKAMAVYGKEPFSKQRDELQ
QKTHVVVGTPGRVMDHIERETLVLDEVKYLIIDEADEMLNMGFIDEVESIINELPTNRVT
MVFSATLPKDVENLCHKYMKDPVNIEIASTGITTETIEHLLIEVKDEEKLPLLKDVTVVE
NPDSCLIFCRTKEHVETVYAELEAANYSCERLHGGLDQQDRFAVMDGFKLGNFRYLVATD
VAARGIDIDNVTLVINYDVPMEKESYVHRTGRTGRAGNKGKAITFATPYEGKFVRAIERY
IGFEIPKTEAPSQREVTSGKDAFLEKIGGRRVVKNNKTARINQDIMKLHFSGGKKKKIRA
VDFVGTIAKIPGVTAEDIGIITIQDQMSYVDILNGKGSLVLQAMENTTIKGKKLKVSKAI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaaagttttgcagcttataatctaagcgatgaaataaacagagccattaag
gtgttaaaatacgatactcccacagaggttcagcgtgaagtcctgccattagcactggaa
aatcacgatctagtggtaaaatcacaaacaggcagcggaaagacggcatcctttggcatc
cctatttgtgaattggtagaatgggaagaaagaaatccacaggcgcttattcttacgcca
actagggaacttgctgttcaagttcgcgacgatatcaccaatataggcaggtttaaacgg
attaaagcaatggccgtttatggaaaagagcctttttcgaagcaaagagatgaattgcag
caaaaaacgcatgttgtcgtcgggacacctggacgtgttatggatcatatcgaaagagaa
acccttgtattagatgaagtaaaatatcttatcatcgatgaagccgatgaaatgctgaat
atgggtttcattgacgaggtggaatcgataattaacgagcttcctacaaacagagtaacg
atggttttttcagccaccttaccgaaagatgttgaaaatctctgccataagtatatgaaa
gaccctgttaatatcgagattgcctcgaccggaatcacgacggaaacgattgaacatctt
ttaatcgaagtgaaagatgaagaaaagctgccacttctaaaagatgtaaccgtcgttgaa
aaccccgacagctgtctgatcttttgccgcacgaaggaacacgtcgaaactgtgtatgcc
gaattggaagcagccaactattcttgtgaacgacttcatggaggcttagatcaacaagat
cggtttgccgtgatggatgggttcaaattggggaatttccgttatctggtcgccaccgat
gtagcggcacgtggaattgatattgataatgtcaccctcgtcattaattatgacgttcca
atggaaaaagagagctatgtccaccgcacaggacgaaccggccgtgccggcaacaaagga
aaagcaattacgtttgcgactccttatgaaggaaaattcgttcgggcgattgaaaggtac
attggctttgaaattcctaaaacagaagctcctagtcaacgggaagttactagtgggaag
gatgctttcttggaaaaaatcggcggcaggcgcgtggtgaaaaataataaaacggcgcgg
attaaccaagatatcatgaaactccatttcagcggagggaaaaagaagaagattcgcgcg
gttgattttgttggaacaatcgcaaagattccaggagtaacagcagaggatatcggaata
ataaccatccaggatcaaatgtcctatgttgatattcttaatggcaagggatcactcgtc
ttacaagcgatggagaatacaaccattaaagggaaaaagctgaaagtgagtaaagcgatt
aaataa
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