KEGG   Neobacillus novalis: QNH39_08840
Entry
QNH39_08840       CDS       T09082                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nnv  Neobacillus novalis
Pathway
nnv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nnv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QNH39_08840 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnv03019]
    QNH39_08840 (rnjA)
Messenger RNA biogenesis [BR:nnv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QNH39_08840 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF4453 pre-PUA_NIP7
Other DBs
NCBI-ProteinID: WHY87923
UniProt: A0AA95MUE7
LinkDB
Position
complement(1762697..1764364)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFVTHGHEDHIGGIPYLLREVNIPIYGGKLALGLIKNKLEEHGLLRNAKLI
EIKEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPPGQIVHTGDFKFDFTPVGEPANITK
MAEIGKEGVLCLLSDSTNSEIPDFTMSERRVGDSIHDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVVNGRKVAVFGRSMEAAINIGLDLGYINAPKETFIEANQINRIPADKVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINLLYRAGAEVIHGKL
SNVHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQIMHAKLAVDCGVENENCFIMDNGE
VLALSEDTAQVAGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVVVVVSINMKEFKI
ASGPDLISRGFVYMRESGDLINDAQNLITKHLNKVMERKTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcaaactgcagtttttgcgcttggcggtttaggtgaaatc
ggcaagaacacgtatgcagttcagttccaggatgaaatcatattaatcgatgccggaata
aagtttccggaagatgaacttttaggtattgattatgtaataccagattatacctacctt
gttaaaaatgaagataaaattaaagggttatttgtgacccacggacatgaagatcacatt
ggcggtattccctatttattgcgtgaagtcaatattcccatttacggcggaaagcttgcc
cttggattaatcaagaataaactggaagaacacggtctattacggaatgctaaattgatt
gaaataaaagaagatgatgtcattaaattccgcaaaacatcggttacgtttttccgaaca
acccacagcattccggattcctatggaattgttgtgaaaacccctcccggacaaatcgtc
catacaggggattttaaatttgattttacccctgtaggtgaacctgccaatatcacaaaa
atggcggagatcggtaaagaaggtgtattgtgtttactttctgatagtacaaatagtgaa
attccagattttacaatgtcagaacgccgggttggtgatagtatccacgatatattccgt
aaagtagatggacgaatcatctttgctactttcgcttctaatatccacagattacagcag
gtcgtagaggcagcagtggtcaacggaagaaaagtagccgtttttggcagaagcatggaa
gcagcgattaatatcggccttgacttagggtatattaacgcaccaaaagaaacgtttatt
gaagcaaatcaaattaatcgcattcctgccgataaagtgactattctttgtacaggcagc
cagggtgaaccgatggcggcactttcaagaattgccaacggaacacacagacaaattcaa
atcatccctggagatacggttgtattttcatcatcacctattccggggaacacaataagt
gtcagcagaacgattaatttgctgtatcgtgctggtgcagaagtcattcacggcaaatta
agtaatgtccatacatccgggcacggcggacaagaagaacaaaaattaatgctccggtta
attaaaccgaaattctttatgccgatccatggtgaatatcggatgcagattatgcatgct
aaacttgctgtcgattgcggtgtcgaaaacgaaaattgctttattatggataatggtgaa
gtgctggcactttcggaagatacggcacaagtggctggaaagattccatccggttctgta
tatatcgatggaagcggcgtaggagacattggaaatattgtcttacgcgaccggagaatt
ctttcagaagaaggcttggtcgttgtggttgtcagtatcaatatgaaggaatttaaaatt
gcttcaggtccagatcttatttcacgaggatttgtctatatgagagaatcaggcgattta
atcaatgacgcccaaaatctaattacaaaacacttaaataaggtaatggagcgtaagaca
agtcaatggtctgaaatcaaaaatgaaattaccgatacattagcaccattcctttacgaa
aaaacaaaacgcagaccgatgattttaccaatcattatggaagtgtaa

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