Neobacillus novalis: QNH39_08840
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Entry
QNH39_08840 CDS
T09082
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nnv
Neobacillus novalis
Pathway
nnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH39_08840 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnv03019
]
QNH39_08840 (rnjA)
Messenger RNA biogenesis [BR:
nnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNH39_08840 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
pre-PUA_NIP7
Motif
Other DBs
NCBI-ProteinID:
WHY87923
UniProt:
A0AA95MUE7
LinkDB
All DBs
Position
complement(1762697..1764364)
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFVTHGHEDHIGGIPYLLREVNIPIYGGKLALGLIKNKLEEHGLLRNAKLI
EIKEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPPGQIVHTGDFKFDFTPVGEPANITK
MAEIGKEGVLCLLSDSTNSEIPDFTMSERRVGDSIHDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVVNGRKVAVFGRSMEAAINIGLDLGYINAPKETFIEANQINRIPADKVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINLLYRAGAEVIHGKL
SNVHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQIMHAKLAVDCGVENENCFIMDNGE
VLALSEDTAQVAGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVVVVVSINMKEFKI
ASGPDLISRGFVYMRESGDLINDAQNLITKHLNKVMERKTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatgatcaaactgcagtttttgcgcttggcggtttaggtgaaatc
ggcaagaacacgtatgcagttcagttccaggatgaaatcatattaatcgatgccggaata
aagtttccggaagatgaacttttaggtattgattatgtaataccagattatacctacctt
gttaaaaatgaagataaaattaaagggttatttgtgacccacggacatgaagatcacatt
ggcggtattccctatttattgcgtgaagtcaatattcccatttacggcggaaagcttgcc
cttggattaatcaagaataaactggaagaacacggtctattacggaatgctaaattgatt
gaaataaaagaagatgatgtcattaaattccgcaaaacatcggttacgtttttccgaaca
acccacagcattccggattcctatggaattgttgtgaaaacccctcccggacaaatcgtc
catacaggggattttaaatttgattttacccctgtaggtgaacctgccaatatcacaaaa
atggcggagatcggtaaagaaggtgtattgtgtttactttctgatagtacaaatagtgaa
attccagattttacaatgtcagaacgccgggttggtgatagtatccacgatatattccgt
aaagtagatggacgaatcatctttgctactttcgcttctaatatccacagattacagcag
gtcgtagaggcagcagtggtcaacggaagaaaagtagccgtttttggcagaagcatggaa
gcagcgattaatatcggccttgacttagggtatattaacgcaccaaaagaaacgtttatt
gaagcaaatcaaattaatcgcattcctgccgataaagtgactattctttgtacaggcagc
cagggtgaaccgatggcggcactttcaagaattgccaacggaacacacagacaaattcaa
atcatccctggagatacggttgtattttcatcatcacctattccggggaacacaataagt
gtcagcagaacgattaatttgctgtatcgtgctggtgcagaagtcattcacggcaaatta
agtaatgtccatacatccgggcacggcggacaagaagaacaaaaattaatgctccggtta
attaaaccgaaattctttatgccgatccatggtgaatatcggatgcagattatgcatgct
aaacttgctgtcgattgcggtgtcgaaaacgaaaattgctttattatggataatggtgaa
gtgctggcactttcggaagatacggcacaagtggctggaaagattccatccggttctgta
tatatcgatggaagcggcgtaggagacattggaaatattgtcttacgcgaccggagaatt
ctttcagaagaaggcttggtcgttgtggttgtcagtatcaatatgaaggaatttaaaatt
gcttcaggtccagatcttatttcacgaggatttgtctatatgagagaatcaggcgattta
atcaatgacgcccaaaatctaattacaaaacacttaaataaggtaatggagcgtaagaca
agtcaatggtctgaaatcaaaaatgaaattaccgatacattagcaccattcctttacgaa
aaaacaaaacgcagaccgatgattttaccaatcattatggaagtgtaa
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