Neobacillus novalis: QNH39_18750
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Entry
QNH39_18750 CDS
T09082
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nnv
Neobacillus novalis
Pathway
nnv03410
Base excision repair
nnv03430
Mismatch repair
nnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNH39_18750 (recJ)
03430 Mismatch repair
QNH39_18750 (recJ)
03440 Homologous recombination
QNH39_18750 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnv03400
]
QNH39_18750 (recJ)
DNA repair and recombination proteins [BR:
nnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QNH39_18750 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QNH39_18750 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QNH39_18750 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WHY84678
UniProt:
A0AA95MQ65
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All DBs
Position
complement(3724985..3726655)
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AA seq
556 aa
AA seq
DB search
MFKNQTIWRQVSPPLCSHPNKSIIYFLARQTCIEPILMHGLFEQGINKEERVWSFLYPSI
NDLHNPFLLNDMKKSVFRIIQAMKRNETILIFGDYDLDGISSSTLMHQCLKYFGANVSFR
LPLRHEGYGISPKAIEEISNLGVSLIITVDNGSSAHEAMRMAKEKGIDVIVTDHHEILGE
FPNCYAFINPKRFDNTYPYTNLSGAGVAFKLVQALFQATSNLSWEKHFHDYIEMATLGTI
ADLMPLEGENRVICSLGLCKMNNDPSRVLKKLFGLLNLSYVDSTKIGFQIAPIFNSVGRI
DDPNKATKLLTNTDTSEEELKELMAINRKRQSLTTEQYQQAEQDILKNGWDNEKIIVVHG
EFHNGIIGIIAARVAENFHKPTIVISQSGTGSARTVQGSNFSIINPIKQCSQYLKKYGGH
QGAAGLSIDLEKIDLFRKAVQLAIMNDSEIKPMIQYTNQFDLMKFPVELFKDLVALEPFG
IGNPKPIFHCPPTQQLSNFELFGNNKEHVKLTINKKKLLAFSKGHHFKKQWTTLEFLYTP
NCWKEKNFLINDLRIF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaatcaaactatatggcggcaagtaagtcctccactatgctcccatcctaat
aagtcgataatttattttttagctcgacaaacttgtatcgaacctattttaatgcatgga
ttgtttgagcaaggaatcaataaggaagagcgagtttggagctttttatatccttccatt
aacgatttacacaatccttttttgttaaatgatatgaaaaaatccgtatttcggattatt
caagcgatgaaacgaaatgaaaccattttaatctttggcgattatgatctagatggcatc
agttcttcgacacttatgcatcaatgcctaaaatactttggtgcaaatgtgtcctttcgc
ttaccactaagacatgaagggtatggtatttcacctaaagcaatagaggaaatttcaaat
ctgggtgtttcacttattatcacagttgataatggttcaagtgctcatgaggctatgaga
atggcaaaagaaaagggaattgatgttattgtaacagaccaccatgaaattttaggtgaa
ttcccaaactgctatgcttttatcaatccgaaaagattcgataacacatacccttacact
aacctctctggtgcaggtgttgcattcaaacttgttcaagctttatttcaagcaacttcc
aatttatcttgggaaaaacactttcatgattatattgaaatggcgaccttaggaacaata
gcagatttaatgccactagaaggtgaaaatagagtaatttgttcgttaggtctttgtaaa
atgaataacgatcctagccgagtattaaagaaattatttggcttacttaatctctcatac
gttgatagcactaaaataggatttcaaatcgctcccatttttaattctgttgggcgtatt
gatgatccaaataaagcaacaaagctattaacgaatacagatactagcgaggaagaatta
aaagaattaatggcaatcaatcgcaagcgccaatccttaaccactgagcaataccaacag
gctgaacaagacattttaaaaaatggttgggataatgagaaaataatcgttgtacacgga
gaattccacaatggtattatcgggataattgctgcgagagtggctgaaaattttcataaa
cccacaattgtgatatcgcaatcggggactggttctgcaagaactgttcaaggttctaat
ttttcaatcataaatccgattaaacaatgttctcagtatttaaaaaagtacggtggacat
caaggcgctgctggattgtctattgatttagagaaaatagatttatttaggaaagcagtt
caattagcaataatgaatgattcggaaattaaaccaatgattcaatatactaatcagttt
gatttgatgaaatttcctgttgaactttttaaagacttagtggcattggaaccttttgga
ataggaaacccaaaaccaatttttcattgcccgcccacccaacaattaagcaactttgaa
ctatttggaaataacaaagagcatgtaaagttaactatcaataagaaaaaattattagca
ttttcaaaaggtcatcatttcaaaaaacaatggactactcttgaatttttatatactcct
aattgttggaaagaaaagaactttcttattaatgaccttcgaatattttaa
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