Neobacillus novalis: QNH39_22465
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Entry
QNH39_22465 CDS
T09082
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
nnv
Neobacillus novalis
Pathway
nnv02020
Two-component system
nnv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nnv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QNH39_22465 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNH39_22465 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnv03021
]
QNH39_22465 (rpoN)
Transcription machinery [BR:
nnv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNH39_22465 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_17
HTH_38
MarR_2
HTH_Crp_2
Fusion_F0
Fe_dep_repress
LacI
Sec2p
Motif
Other DBs
NCBI-ProteinID:
WHY85348
UniProt:
A0AA95SBS7
LinkDB
All DBs
Position
complement(4451174..4452496)
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AA seq
440 aa
AA seq
DB search
MNLKAGLWQQQTLKLAMTQELSQAIALLQYSAQELTDFLENKALENPLMQIENGNVQPMN
PLMDRNRRRHQKSEKDWIEQLADKPFSLEDHLISQLNIASLSAEQLRVIRYLIHNLDENG
YFLGNLEEIAATLRVSDELVEDGLAVIQTLEPAGIGARDLQECLLMQIYYQNPTNELAQR
IISHYFVLFAEKKWKQIAKELKVSLKEIQDVFDEVQLLDPKPGSMLRKEITTYIIPDAIV
EQSADGLTVRMFDDALPRISLNESYYKKFKDQDQQVSRFIQDNLQDYQWIVKSIEQRKET
LTRVVAKIVEKQTAFFQKGARHLVPMTMKEVAVELDVHESTVSRAVREKYVQTPTGTFTL
KSFFTSTIQTVAADGNASSTEVKNAINQLIDQENKEKPLSDQEIVEQLKGTNGIVVSRRT
IAKYRDQLGIPSSSKRKRFN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaggcagggttatggcagcagcaaacattaaaattggcgatgacgcaggag
ttatcgcaggcgattgccttattgcagtactcggcccaagaactcactgactttttagaa
aataaagcattggaaaatccccttatgcagattgaaaatgggaatgtccagccgatgaat
cccctaatggaccgcaatcgccggaggcatcaaaagtcggaaaaggactggattgagcag
cttgctgataaaccattttcacttgaagatcatttaatctcgcaactaaatatagctagt
ttatctgcggagcaattaagagtcatccgctatcttattcataatctagatgaaaacggt
tactttttgggtaaccttgaagaaattgcagcaactttacgggtatctgatgaattagtt
gaagatggccttgctgtgattcaaacgcttgaaccagcgggaattggtgcaagagacctt
caagagtgcctgttaatgcaaatctattatcaaaatccaactaacgaacttgcgcaaagg
attatttctcattatttcgtactgtttgccgaaaagaaatggaagcaaattgccaaggaa
ctgaaggtatcgctaaaagaaattcaagatgtttttgatgaagtccaacttctagaccca
aagccggggtccatgttacgaaaagaaatcacgacatacattattcctgatgcgattgtg
gaacaatctgctgacgggctgacggtacgaatgtttgatgatgctctgccaagaataagt
cttaacgagtcctattataaaaaattcaaggaccaagatcagcaggtcagccgttttatc
caggataatcttcaggattatcaatggattgtcaaaagtattgaacaacgaaaagaaacc
ctaacaagggtggttgccaaaatcgtcgaaaaacagacggcattttttcaaaaaggagca
cgccatttagtgccgatgacgatgaaggaagtcgcagttgagcttgatgttcatgaatca
actgtcagccgggcagtccgggaaaaatatgtgcagacaccgactgggaccttcacctta
aaatcctttttcacgagtaccatccaaacagtcgcggcggatggaaatgcctcatcgaca
gaggtgaagaatgcaattaaccaattaatagatcaggagaataaggaaaagccgctttcc
gatcaagaaattgtcgaacaattgaaggggacaaacggaatcgtggtctcaaggcggacc
atcgccaagtaccgcgatcagctggggattccttcctcttcgaaacggaaaaggtttaat
tga
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