Actinomadura parvosata subsp. kistnae: BKM31_00800
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Entry
BKM31_00800 CDS
T04759
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKM31_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noa03400
]
BKM31_00800
Enzymes [BR:
noa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BKM31_00800
DNA repair and recombination proteins [BR:
noa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKM31_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AQZ60242
UniProt:
A0A1U9ZQM5
LinkDB
All DBs
Position
complement(178260..178754)
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AA seq
164 aa
AA seq
DB search
MIDDVLGPSLDVLFCGINPGLMSEATGHHFARPGNRFWPALHLSGFTPRLLSPAEQHLLP
SYGLGITNIVPRASAKASELTREELEAGGAALAAKVASLAPKVLAVLGISAYRTAFARPK
AVIGPQPERVGGVRVWVLPNPSGLNAHWTVATIAEEMGRLRSSL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgacgtcctcggcccctcgctcgacgtgctgttctgcggcatcaaccccggc
ctcatgtccgaggccaccggccaccacttcgcccgccccggcaaccgcttctggccggcg
ctgcacctgtccggcttcacgccgcgcctcctgtcgccggccgagcagcacctgctcccc
tcgtacgggctgggcatcaccaacatcgtgccccgcgccagcgccaaggcgtcggagctg
accagggaggagctggaggcgggcggggcggccctggccgccaaggtcgcctcccttgcg
ccgaaggtgctggccgtgctcggcatctccgcctaccgcaccgccttcgcccgccccaag
gcggtcatcgggccgcagccggagagggtgggcggggtgcgcgtgtgggtgctgccgaac
ccgagcggcctgaacgcccactggacggtggccacgatcgccgaggagatggggcgcctg
cgctcgtccctttga
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