Actinomadura parvosata subsp. kistnae: BKM31_11945
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Entry
BKM31_11945 CDS
T04759
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa03030
DNA replication
noa03430
Mismatch repair
noa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM31_11945
03430 Mismatch repair
BKM31_11945
03440 Homologous recombination
BKM31_11945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noa03032
]
BKM31_11945
03400 DNA repair and recombination proteins [BR:
noa03400
]
BKM31_11945
Enzymes [BR:
noa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM31_11945
DNA replication proteins [BR:
noa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM31_11945
DNA repair and recombination proteins [BR:
noa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM31_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AQZ62089
UniProt:
A0A1U9ZVY7
LinkDB
All DBs
Position
2682765..2686355
Genome browser
AA seq
1196 aa
AA seq
DB search
MTGAVPETTTTRGDRPVESFVHLHVHTEYSMLDGAAKVGLLMDEVARQGMPAVAMSDHGN
VHGAYEFHQSARKAGVKPIIGIEAYVAPVSRHHRKPVFFSDDLALRRSDDDTGAGGDVSG
RGLYTHLTMWAADARGLRNLFRLQSRAWLEGHVQKYPRMDDELLAEHGAGLIATTGCPSG
EVQTRLRLGQYEQAVEAAARHRDLFGPGNYYLELMDHGLPIERRVREDLLRLGKRLALPP
LATNDSHYVTEDQAKAHDALLCVGTGKRLADSDRFRFGGTGYFIKSPARMRELWDAEVPG
ACDNTLLIAERVGDYGEVFAHRDLTPRFPVPEGETESSWLRQEALAGARRRYGGDPPQDV
LDRIDHELSVIDAMGFPGYFLVVADICRYAREHGIGLGPGRGSATGSMVAYCTGITQLDP
IEHKLIFERFLNPERITMPDVDLDFDDRRRDEMIDYVTRKYGDDRVCQIVTFSTIKAKAA
VKDSCRVLGLPYAVGDRITKAFPAAVGGKEIPLAAIHDKSHPRHGEAAELRAMYEQDPDV
RRVIDTATGIEGLTRGTGVHAAGVILSSEPLIDVIPLVKPKAGGPVITGFPFTQAEDMGL
LKMDFLGLRNLTVIGDAIANVRANKGIDIDIFEVPLDDAITYELLARGDTLGVFQLDSGG
MRVLLRLMQPTTFTDIAAVNALYRPGPMEMNAHTNYALRKTGKQKVEPIHPELEQALEPI
LGDTYHLVVFQEQVMAIAQQLAGYSLGAADLLRRAMGKKKKDVLDAEWDRFSAGMRGRGY
SDEAIKAVWDVLVPFSGYGFNKSHTAGYGLVSYWTAYLKANHPCEYLAALLTSVGDDKDK
MAVYLSDCRRLGIKVLPPDVNASRLDFTAVGADIRFGLGAVRNVGANVVAAIVATREAKG
PYTGFDDFLAKVPPVVCNKRVIESLAKAGAFDGLGHHRKALVAVHEQAVDTVIDVKRHQA
HGQDTLFGEAGQSGAFSIAIPDGEWDKATLLAHEREMLGLYVSSHPLDGAERVLDAGRDT
TIADLLASGRQDGTVRISGIVSGLHRKVTKQGSPWAIVTLEDHDASVECLIFPKTYTLYG
EALAEDRVISVRGRINVRDETVSVYGEEIAVLDLATAGTEQPVVISLQESLLNARIVREF
KHILAAHPGRAPVHVHLHRRHAGSLLLDLVPFQVAPGPSFYGDIKALLGATAIGGA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgccgttcccgagactacaaccacgaggggtgatcgaccggtggaatccttc
gtccacctgcacgtccacaccgagtacagcatgctcgacggcgccgccaaggtggggctg
ctgatggacgaggtggcccggcagggcatgcccgcggtggcgatgagcgaccacggcaac
gtgcacggggcgtacgagttccaccagtccgcgcgcaaggccggcgtcaagccgatcatc
ggcatcgaggcgtacgtggcccccgtctcccggcaccaccgcaagccggtcttcttcagc
gacgacctggccctgcgccgctccgacgacgacaccggcgcgggcggcgacgtctccggg
cgcggcctctacacgcacctgacgatgtgggcggccgacgcccgggggctgcggaacctg
ttccgcctccagtcgcgcgcctggctcgaaggacacgtccagaaatatccgcgcatggac
gacgagctgctcgccgagcacggcgccggcctcatcgccaccaccggctgcccctccggc
gaggtgcagacccggctccgcctcggccagtacgagcaggccgtcgaggccgccgcccgc
caccgcgacctgttcggccccggcaactactacctggagctgatggaccacggcctgccc
atcgagcgccgcgtccgcgaggacctgctccgcctgggcaagcgcctcgccctgccgccc
ctggccaccaacgactcccactacgtcaccgaggaccaggccaaggcgcacgacgcgctc
ctgtgcgtcggcaccggcaagcgcctggccgacagcgaccgtttccgcttcggcggcacc
ggctacttcatcaagtctccggcgcggatgcgcgagctgtgggacgccgaggtgcccggc
gcctgcgacaacaccctgctcatcgccgagcgtgtcggcgactacggcgaggtgttcgcc
caccgcgacctcacgccgcgcttccccgtgcccgagggcgagaccgagtcgagctggctg
cgccaggaggccctggccggcgcccgccgccgctacggcggcgacccgccccaggacgtg
ctcgaccgcatcgaccacgagctgtcggtcatcgacgccatgggctttcccggctacttc
ctcgtggtggccgacatctgccgctacgcccgcgagcacggcatcggcctcggccccggg
cgcggctcggccaccgggtcgatggtcgcgtactgcaccggcatcacccagctcgacccg
atcgagcacaagctcatcttcgagcgcttcctcaaccccgagcgcatcaccatgccggac
gtcgacctcgacttcgacgaccgccgccgcgacgagatgatcgactacgtcacccgcaag
tacggcgacgaccgcgtctgccagatcgtcacgttcagcaccatcaaggccaaggccgcc
gtcaaggactcctgccgggtgctcggcctgccgtacgccgtcggcgaccgcatcaccaag
gccttccccgccgccgtcggcggcaaggagatccccctggccgccatccacgacaagagc
cacccccggcacggcgaggcggccgagctgcgcgccatgtacgagcaggaccccgacgtg
cggcgggtcatcgacaccgcgaccggcatcgaagggctcacccgcggcaccggcgtgcac
gccgccggcgtcatcctgtccagcgagccgctgatcgacgtgatcccgctggtcaagccc
aaggccggcgggcccgtcatcaccggcttcccgttcacgcaggccgaggacatgggcctg
ctcaagatggacttcctcggcctgcgcaacctgaccgtgatcggcgacgcgatcgcgaac
gtgcgcgccaacaagggcatcgacatcgacatcttcgaggtgccgctcgacgacgccatc
acgtacgagctgctggcccgcggcgacacgctcggcgtcttccagctcgacagcggcggc
atgcgcgtcctgctcagactcatgcagcccaccacgttcaccgacatcgcggccgtgaac
gccctctaccggcccggcccgatggagatgaacgcccacaccaactacgcgctgcgcaag
accggcaagcagaaggtggagccgatccaccccgagctggagcaggccctggagcccatc
ctgggcgacacctaccacctggtcgtcttccaggagcaggtcatggccatcgcccagcag
ctcgccggctactccctcggcgccgccgacctgctgcgccgcgccatgggcaagaagaag
aaggatgtcctggacgccgaatgggaccgcttctcggccggcatgcgcggccgtggctac
tccgacgaggcgatcaaggcggtctgggacgtgctcgtgcccttcagcgggtacggcttc
aacaagtcgcacaccgccggctacggcctggtctcctactggacggcctacctcaaggcc
aaccatccttgcgagtacctggccgcgctgctcacctccgtcggcgacgacaaggacaag
atggccgtctacctgtccgactgccgccgcctcggcatcaaggtgctgccgcccgacgtc
aacgccagcaggctcgacttcaccgccgtcggcgccgacatccgcttcggcctcggcgcc
gtgcgcaacgtcggcgccaacgtcgtggccgccatcgtcgccacccgcgaggccaagggc
ccctacaccggcttcgacgacttcctcgccaaggtgccgcccgtagtctgcaacaagcgc
gtcatcgagtcgctggccaaggccggggcgttcgacgggctcggccaccaccgcaaggcg
ctggtggcggtgcacgagcaggccgtggacaccgtcatcgacgtcaaacgccaccaggcc
cacgggcaggacacgctgttcggcgaggcgggccagagcggcgccttctcgatcgcgatc
cccgacggcgagtgggacaaggcgaccctgctcgcccacgagcgggagatgctcggcctg
tacgtctccagccacccgctcgacggcgccgaacgcgtcctggacgccggccgcgacacc
acgatcgccgacctgctcgcctccggccgccaggacggcaccgtcaggatcagcggcatc
gtctccggcctgcaccgcaaggtcaccaagcagggcagcccgtgggcgatcgtcaccctg
gaggaccacgacgcctccgtggagtgcctgatcttccccaagacctacaccttgtacggc
gaggcgctggccgaggaccgcgtgatctcggtgcgcggccggatcaacgtgcgcgacgag
acggtcagcgtgtacggcgaggagatcgccgtcctcgacctcgccacggcgggcaccgag
cagcccgtggtgatatcgctccaggagagcctgctgaacgcccggatcgtccgggagttc
aagcacatcctcgccgcccatcccgggcgtgcgcccgtccatgtgcacctgcaccgccgg
cacgccgggagcctgctgctggacctggtgccgttccaggtcgcgcccggcccgtccttc
tacggcgacatcaaggcgctcctgggcgccacggcgatcggcggcgcgtga
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