Actinomadura parvosata subsp. kistnae: BKM31_30455
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Entry
BKM31_30455 CDS
T04759
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa00040
Pentose and glucuronate interconversions
noa01100
Metabolic pathways
noa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BKM31_30455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM31_30455
Enzymes [BR:
noa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BKM31_30455
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-ProteinID:
AQZ65193
UniProt:
A0A1V0A4R6
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All DBs
Position
6810697..6811647
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AA seq
316 aa
AA seq
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MRTSRRVLTVVTGLAAAAAGLTAATATPAAADTPLVGWATQGGGTTGGGSTPPTTVSSAS
ALTSALSSGSAAVIRVSGTISCSGMLRVTSNKTVIGNAGATISGCGFNVSQASNVIIRNL
TFRNWNDDGINVQYSTRVYIDHNSFSNGYDGAVDIKRSSDYVTVSWNRFFDHDKTMLLGH
SDSNGSEDRGHLRVTYHHNWFDGTNQRHPRVRFGNPVHVFNNYYGNVGSYGVASTQEAGV
LVEGNYFENTDDPYHLGEGSSPAGSLVARNNHFVNSGSGQAGGSVKSIPYSYSLDSASSV
KSIVTAGAGAGRITIP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatcacgacgtgtcctgacagtcgtcaccggcctggccgccgcggccgcagga
ctgaccgcggcgaccgcgacccccgccgcggccgacaccccgctggtcggctgggccacg
cagggcggcgggaccaccggcggcggcagcacgccccccacgaccgtctcctccgcctcc
gcgctgacgagcgccctgtcgtccggctccgccgccgtgatcagggtctccgggacgatc
tcctgctccggcatgctccgcgtcacctcgaacaagaccgtcatcggcaacgcgggcgcg
accatctccgggtgcggcttcaacgtgtcgcaggcgtcgaacgtcatcatccgcaacctc
accttcaggaactggaacgacgacggcatcaacgtccagtactcgacccgggtctacatc
gaccacaactccttcagcaacggctacgacggcgccgtggacatcaagcggtccagcgac
tacgtcaccgtctcctggaaccggttcttcgaccacgacaagaccatgctgctcggccac
agcgacagcaacggctccgaggaccgcgggcacctgcgggtgacgtaccaccacaactgg
ttcgacggcaccaaccagcgccacccgcgcgtgcgcttcggcaacccggtgcacgtcttc
aacaactactacggcaacgtcggcagctacggcgtcgcctccacccaggaggccggcgtg
ctcgtcgaaggcaactacttcgagaacaccgacgacccgtaccacctcggcgagggcagt
tccccggccggcagcctggtggcgcggaacaaccacttcgtcaactccggcagcgggcag
gccggtggcagcgtcaagtcgatcccgtactcgtactcgctcgacagcgcctccagcgtc
aagtccatcgtgacggcgggcgccggcgcgggccgcatcaccatcccctga
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