Actinomadura parvosata subsp. kistnae: BKM31_32270
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Entry
BKM31_32270 CDS
T04759
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa00040
Pentose and glucuronate interconversions
noa01100
Metabolic pathways
noa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BKM31_32270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM31_32270
Enzymes [BR:
noa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BKM31_32270
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AQZ70823
UniProt:
A0A1V0AKV7
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Position
7231973..7233202
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AA seq
409 aa
AA seq
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MRRPSPTRPEPGRQVLPRDDGWAAATTGTTGGSAARPENVHVVSTRAELLAALGDPADNT
PRIIYVKGAVDADTDASGNPLTCDDYAVNGYSLPAYLAAYDPAVWGRTSVPSGPLEEARK
ASYAKMAEHVTVTIGSNVTLMGLGGDAALKSFGLRISNADNVIVRNLTITDTSDCFPQWD
PTDGAEGNWNASFDNMEVSGSTHVWLDHNTLNDGDNPDSGQPLYFGRPYQVHDGLLDVVR
GSNYVTLSWNHLSGHDKVTLIGNTDNPARYGEQDKLKVTLHHNYFEALGQRAPRVRFGQV
HVYNNYYRGGDGHGYSIGVGVGSKVYAESNAFDGIDAAKVLTVFGGKAITAEDNLVDGVV
TDVVAAYNEANGTTLGTDAGWTPTLVPRVHPAKALKHLVPAGAGAGRLR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ctgcgccgtccctctcccaccaggcccgagccgggccgacaggtgctgccgcgcgacgac
ggctgggcggccgccacgaccggcaccaccgggggctcggccgcccgccccgagaacgtg
cacgtcgtctccacgagggcggagctgctggccgcgctgggcgacccggccgacaacacc
ccgcggatcatctacgtcaagggcgccgtcgacgccgacaccgacgcctccggcaacccg
ctgacctgcgacgactacgccgtcaacggctacagcctgcccgcctacctggccgcctac
gacccggccgtctggggcaggacgagcgtcccctcagggccgctggaggaggcgcgcaag
gcgtcgtacgcgaagatggccgagcacgtgacggtcaccatcggctccaacgtcacgctc
atgggcctcggcggggacgccgcgctgaagagcttcggcctgcgcatcagcaacgccgac
aacgtcatcgtgcgcaacctgaccatcaccgacacctccgactgcttcccgcagtgggac
ccgacggacggcgccgagggcaactggaacgcctccttcgacaacatggaggtctccggc
tccacccacgtgtggctggaccacaacacgctcaacgacggcgacaaccccgactctggc
cagccgctctacttcggccgcccgtaccaggtgcacgacgggctgctcgacgtcgtgcgc
ggctcgaactacgtgacgctctcctggaaccacctcagcggccacgacaaggtgacgctc
atcggcaacaccgacaacccggcccggtacggcgagcaggacaagctcaaggtcaccctg
caccacaactacttcgaggcgctcggccagcgcgcgccgcgggtgcgcttcgggcaggtg
cacgtctacaacaactactaccggggcggcgacgggcacggctacagcatcggggtcggc
gtcggctccaaggtgtacgccgagagcaacgccttcgacgggatcgacgcggccaaggtg
ctgacggtgttcggcggcaaggcgatcacggccgaggacaacctcgtggacggggtggtc
accgacgtggtggccgcgtacaacgaggccaacggcacgacgctcggcacggacgcgggc
tggacgcccacgctggtgccccgcgtgcatccggccaaggcgctgaagcacctcgtcccg
gcgggcgcgggcgcgggccgcctgcgctga
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