Actinomadura parvosata subsp. kistnae: BKM31_32530
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Entry
BKM31_32530 CDS
T04759
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
noa
Actinomadura parvosata subsp. kistnae
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKM31_32530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noa03021
]
BKM31_32530
Transcription machinery [BR:
noa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKM31_32530
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AQZ65557
UniProt:
A0A1V0A5R9
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Position
complement(7292309..7293445)
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AA seq
378 aa
AA seq
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MLPSGPPSVDQVADLVAKGRERGSVTVDDVAAALDRSELPSDALERVVRMLAENGVEVLE
PQGDEESTRADEEDVGKRAPTSDLVRIYLREIGRVPLLTAEEEVELAKSIEAGLFAEDKL
ANGVSRLAFPEFRELVWQGTRAKQRLIEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLI
RAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLHQD
LGREPIPEEIAKEMDLPVDRVVEIQRIAQEPVSLQSPIGEEDSDLGDFIEDADAVVPMEA
AAFIMLQDQLDDILATLSDREQRIIQLRFGLADGHPRTLEEVGREFGVTRERIRQIESKT
LAKLRHPTRAQMLRDYLD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtgctgccaagtggaccgccatccgtagatcaggtggcggacctcgtcgcgaagggaagg
gagcgcgggagcgtaaccgtcgatgacgtcgcagccgcgcttgaccgatccgagttgccg
tccgacgcgctggagcgcgtcgtgcgcatgctcgccgagaacggcgtggaggtcctcgag
ccccagggcgacgaggaatccacccgcgccgatgaggaagacgtaggcaagcgggcgccg
accagcgatctggtccgtatttatctacgggagatcggccgtgtgcctttgctgaccgct
gaggaggaggtggagctcgccaagtcgatcgaggccggcctgttcgcggaggacaagctg
gccaacggtgtctcgcgtctggccttcccggagttcagggagctcgtctggcagggcacc
cgggccaaacagcggctgatcgaagccaacctcaggctcgtggtgtcgatcgccaagcgg
tacgtgggccgcggcatgctgttcctggacctgatccaggagggcaacctcgggctcatc
cgggcggtcgagaagttcgactacacgaagggttacaagttctccacctacgcgacctgg
tggatcaggcaggcgatcacccgggcgatcgccgaccaggcgcggacgatccgcatcccg
gttcacatggtggagacgatcaacaagctcgtcagggtgcagcgccagctccaccaggac
ctcggccgcgagccgatccccgaggagatcgccaaggagatggacctccctgtcgatcgc
gtggtggagatccagcgcatcgcccaggagcccgtctcgctgcagtcgccgatcggtgag
gaggactccgacctcggagacttcatcgaggacgccgacgctgtcgtgcccatggaggcc
gccgccttcatcatgctgcaggaccagctcgacgacatcctcgccaccctgtccgaccgc
gagcagcgcatcatccagctccgcttcggcctggccgacgggcacccgcgcacgctggag
gaggtgggcagagagttcggcgtgacccgcgagcgcattcgccagatcgagtcgaagacg
ctggccaagctccgccacccgacgcgcgcgcagatgttgcgggactacctggactga
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