Actinomadura parvosata subsp. kistnae: BKM31_40660
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Entry
BKM31_40660 CDS
T04759
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKM31_40660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noa03021
]
BKM31_40660
03400 DNA repair and recombination proteins [BR:
noa03400
]
BKM31_40660
Enzymes [BR:
noa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKM31_40660
Transcription machinery [BR:
noa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKM31_40660
DNA repair and recombination proteins [BR:
noa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKM31_40660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AQZ66931
UniProt:
A0A1V0A9Q6
LinkDB
All DBs
Position
complement(9089210..9093085)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITHVDTEMRERDLPSLEAKISVERQHIEQRRDADVEARQKKLEAD
LAELEAAGAKGDQRRKVREGAEREMRQLRDRAQRELDRLDEVWSRFKNLKVQDLEGDELL
YREMRDRFGRYFKGGMGAQAIQDRLISFDLDAEAENLRETIRSGKGQKKARALKRLKVVS
AFLNTTNSPRGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGKPVTMPTQDMVIGLYWLTTQKDGALGEGR
VFGSIAEAQMAFDRRELEIQAKIQIRLKDVLPPRDWVAPEGWEPGDPIRLETTFGRCLFN
QTLPDSYPFVDFQVGKKQLSTIVNELAETYPKIEVANSLDALKDAGFRWATRSGVTISIE
DVVAPPNKQDIMENYERRADKVQREYERGLITDEERRQELIEIWTHATADVETDMVNAFP
ATNPVWMMVNSGARGNKMQVRQIAGIRGLVSNTKGETIPRPIKASFREGLSVLEYFISTH
GQRKGLADTALRTADSGYLTRRLVDVAQDVIVREIDCGTDRAVPLHVADRDASGNLVKAE
NAESNVHGRILAEDVEVDGKIIVPAGVDINDTHVTKLVEAGVETVRTRSALVCEAKIGVC
ATCYGRSLATGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITHGLPRVTEL
FEARIPKGVAPISEAEGRVRIDETDKTRKIVITPDDGSEEIAYPVSMRSRLLVQEGQRVS
VGQQLVAGAVNPNEVLRILGPRAVQLHLVAEVQQVYRSQGVSIHDKHIEIIVRQMLKRVN
VLESGDTDLLPGELVERPRFEQMNRETVAEGGSPAAGRPVLMGITKASLATESWLSAASF
QETTRVLTDAAIHAKSDSLLGLKENVIIGKLIPAGTGMPQYRNIRVEPTEEAKAAMYTVG
GYDGSAADYTFGTGSGEAVPLEEYDFGQYNR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgctagacgtcaacttcttcgacgagcttcggatcgggctggcgacggccgacgacatt
cgtcagtggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggcccgacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccg
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgcatgtcgac
accgagatgcgtgagcgtgacctgccctcgctggaggcgaagatctccgtcgagcggcag
cacatcgagcagcgccgcgacgccgacgtcgaggcccggcagaagaagctcgaggccgac
ctggccgagctggaggccgccggcgccaagggtgaccagcgccgcaaggtgcgtgagggc
gccgagcgcgagatgcgccagctgcgcgaccgcgcccagcgcgagctcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagatgcgcgaccgcttcggccgctacttcaagggcggcatgggcgcgcaggcg
atccaggaccgcctgatcagcttcgacctcgacgccgaggccgagaacctgcgcgagacg
atccgcagcggcaagggccagaagaaggcccgcgccctcaagcggctcaaggtcgtctcg
gcgttcctgaacaccaccaactcgccgcgcggcatggtgctcgactgcatcccggtcatc
ccgccggacctgcgccccatggtgcagctcgacggtggccggttcgccacgtccgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgtctgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggtcgcccggtcaccggccccggcaaccggccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgagtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagaggctg
gtcgacctcaaccacgcccagaacatcaagtcggccaagcggatggtcgagcgcgcccgc
cccgtggtgtgggacgtgctcgaagaggtcatcaccgagcacccggtgctgctcaaccgc
gcgcccacgctccaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgccttcaacgcggacttcgacggcgaccag
atggccgtgcacctgccgctgtcggctgaggcccaggccgaggcacgcatcctgatgctc
tcgaccaacaacatcctcaagccggccgacggcaagcccgtcaccatgcccacccaggac
atggtcatcggcctctactggctgaccacccagaaggacggcgcgctgggcgagggccgc
gtgttcggctccatcgccgaggcgcagatggccttcgaccgccgcgagctggagatccag
gcgaagatccagatccggctcaaggacgtcctgccgccgcgcgactgggtggcccccgag
ggctgggagccgggcgacccgatccgcctggagaccacgttcgggcggtgcctgttcaac
cagacgctgcccgacagctaccccttcgtcgacttccaggtcggcaagaagcagctgtcg
acgatcgtgaacgagctggccgagacctaccccaagatcgaggtcgcgaactcgctcgac
gcgctcaaggacgccggcttccgctgggcgacccgttccggggtgacgatctccatcgag
gacgtcgtcgcgcccccgaacaagcaggacatcatggagaactacgagcgccgggccgac
aaggtccagcgcgagtacgagcgcggtctgatcaccgacgaggagcgccgtcaggagctc
atcgagatctggacgcacgcgacggccgacgtcgagaccgacatggtcaacgccttcccg
gcgaccaacccggtctggatgatggtcaactccggtgcccgtggtaacaagatgcaggtc
cggcagatcgccggtatccgcggcctggtgtccaacaccaagggtgagacgatcccgcgg
ccgatcaaggcctcgttccgcgagggcctgtcggtgctggagtacttcatctccacccac
ggtcagcggaagggtctggccgacaccgccctgcgtaccgccgactcgggttacctgacc
cgtcgtctggtggacgtcgcccaggacgtcatcgtccgcgagatcgactgcggcaccgac
cgcgcggtcccgctgcacgtggccgaccgcgacgcgtcgggcaacctcgtcaaggccgag
aacgccgaatcgaacgtgcacggccgcatcctggccgaggacgtcgaggtcgacggcaag
atcatcgtcccggcgggcgtcgacatcaacgacacccacgtgacgaagctggtcgaggcc
ggcgtcgagaccgtccgcacccgcagcgcgctcgtctgcgaggccaagatcggtgtctgc
gccacctgctacggccgctcgctggccaccggcaagctcgtggacgtcggcgaggcggtc
ggcatcatcgccgcccagtcgatcggtgagcccggcacgcagctgacgatgcgtaccttc
cacaccggtggtgtggccggtgccgacatcacccacggtctgccccgtgtcacggagctg
ttcgaggcgcgcatccccaagggtgtcgccccgatctccgaggccgagggccgggtccgg
atcgacgagaccgacaagaccaggaagatcgtcatcaccccggacgacgggtccgaggag
atcgcctacccggtctcgatgcgctcgcgcctgctcgtgcaggaggggcagcgcgtctcg
gtcggtcagcagctcgtcgccggcgccgtcaaccccaacgaggtgctgcgcatcctcggc
ccgcgggccgtgcagctgcacctggtggcggaggtccagcaggtctaccgctcgcagggt
gtgtcgatccacgacaagcacatcgagatcatcgtgcggcagatgctcaagcgcgtgaac
gtgctggagtccggtgacaccgacctgctgcccggcgagctcgtggagcgcccgcgcttc
gagcagatgaaccgcgagaccgtggccgagggcggctcgcccgccgccggccgtccggtg
ctcatgggcatcacgaaggcgtcgctggccaccgagtcgtggctgtcggcggcctccttc
caggagacgaccagggtgctgacggacgcggcgatccacgccaagtccgactcgctgctg
ggcctgaaggagaacgtcatcatcggtaagctcatcccggccggtacgggcatgccccag
taccgcaacatccgggtcgagccgaccgaggaggccaaggccgccatgtacaccgtgggc
ggctacgacggctccgcggccgactacaccttcggcaccggcagcggcgaggccgtcccg
ctggaggagtacgacttcggccagtacaaccggtaa
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integrated database retrieval system
